Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1003 ATGGATCGGCTAACACAATTCTCTATGTTTTTAATAGCTGTTCTCCAATTCATATCAGGTGTAACTTCAACAGAATTCACAGTGATTAACAAATGCAACTACACAGTATGGCCAGGCATTTCTTCAGCCGCTGGCAATAATGATAATCCATTATCAACCACAGGTTTTGTTCTTAAAACAGGTGAGTCTAGGATAATCTCTGTGCCCACTCCTTGGAATGGCCGATTTTGGGGTCGGACTCAATGCACACAAGACTCCACTGAAAGAAACTTCTATTGTCTCACCGGTGACTGTGGCTCTGGGAAGCTCGAATGCCAAGGCAGAGGCGGCACACTGCCCATGACATTGATAGAAATTGCTGTAGGACAACCCGACGGGCTTGATTTCTATGACGTGAGCTTGGTAGATGGATTCAATGTGCCCGTAGCGGTTGTTCCTCACGGTGGTTGTGGATCCTGCAAGAGCACATATTGTCTGGCAGATATGATCAGCCTATGCCCTTCAGAACTAAGGGTACTGAACAAAGATGGAAAAGTGGTGGCTTGCAACGGCCCTTGTGAGGCAGATGGATCATCACAAACTTGTGGGAACAACCCTTCAGCGCCGTCCTCTTATGCACAACTATTCAAGAGTGTTTGCCAACGTGCCTATAGCTATCCTCAAGATTATCAGCTAAGCACATACACATGTGAAGGTGCAGATTATAATATCACCTTTTGTGAATCCCCCTACACAAATTTGGAGACATCTGATTCCCCATCATGCACGGAAACCGTCACATCATCTCTCTACATCAAGGATCCAGATACAATAAGCTCCAAAGGGGGTTTGTTCACACTAGGGTTCTTCAGTCCTGGAAATTCTACAAATCGCTATGTGGGAATTTGGTACATGTCCAAGTCCACTATTGTATGGGTAGCTAACAGAAATCGACCATTGAGGGATACTTCAGGAACTGTTAGGATATCTGAAGATGGCAATCTCGTGGTATTAGATGGGCAAAACCAAACCATTTGGTCATCATATGTATCAAATATTTCATCTACTACTAGCTTTCAGATTTTAGATTCTGGAAACCTTGTCTTAATCGATAACATGAACAACACCGTATGGCAAAGTTTTGAGCATCCTTCAGATTCATTGTTGCCAAGAATGAAAATTACCAGCAACAAAAGAACAGGGGAGAAACAGAAGTTGACAGCATGGACAAATCAGTCTGATCCAACCCTTGGCAATTTCTCTCTGAGCCTTGAACAACTAAATTTTGCAGAATTGTTCATATGGAATGCAACTAGCCCCTTTTGGCGTAGTGGTCCATGGAATGACCAAGAACTTTCAACAGTCCTCAAGTTGAGTTCCGAGAATGATAATGGTGCCGAAGAGATGGTTGTTAGCTTATCAAATGGGCCAGACATCAAAGAGATAGTTGTTTTGAATCCAATGGGAAAGTTATTGCATAAACAATGGGATGATACTAAGAGGCAATGGCAAGAAACGAATCTTGTTCAAAATTCAGATTGTGATGTTTATGGTATATGTGGGGAATTTGGAATATGCAATTCAAAGCATGCACCAATCTGCAGTTGTTTGAGTGGGTTTGAACCAAGAAATAGGGAGGAATGGAATAGACAAAATTGGGCAGGTGGTTGTGTTAGGAAATCACCTCTGCAATGTGAGAAAGACAAAAATGGGAGTTCCAGTGGAAAGGAAGATACATTTCTCCTTCTGCAAAATGCTAAGGCACCGGACTTAGGAGAACAATCATCTAATTCAGAAGATAAATGCAGAATCCAGTGCTTGGAGAACTGCACTTGTAAAGCATATTCATATGATTCAGTGCTTGGCTGTATGACTTGGAAAGAAAATCTTATTGACATACAACAGTTCTCAAATGGAGGAAATGGCCTATATATCCGTGCAGCCTATTCAGACTTTGATAAGAAGAGGCATAGGACATTGATAATTATCATTATTGCAGTAATAGCAACCATCATTATCAGTGTCGCTTGTGCCTGTTTCTTATGGAAATGGAAGGCAAAACATTCAGGAAAATGGAATAGCAAACAGTTCTTGTTCAAAAGGCATGGTGCAAATGTAGACAAAACAAGTGGCAATACCATTGGACAATTGTCAGAAGCTAAATTCCAGGAGTTATTGGTATATAATTTTGAAAAAGTTGCAATGGCTACAAACAACTTTCAATTGACTAATAAACTTGGGGAAGGTGGTTTCGGTCCAGTCTATAAGGGAACACTACAAGATGGTCAGGATGTAGCAGTTAAAAGACTATCAAGAGCATCTGGACAAGGACACGAGGAATTTATGAATGAAATGGTTGTCATTTCCAGGCTTCAACATCGTAATCTGGTAAAGCTTTTAGGTTGTTGTATTGAAAGAGAAGAAAAGATGTTGATCTATGAATACATGCCAAATAGAAGTCTGGATGCAGTTATTTTTGATCCAACAAAACGTAAACTTCTAGATTGGGGAAAGCGCTTTGTCATAATCGAAGGAGTAGCTAGAGGAGTACTTTATCTTCATAGGGACTCTAGAGTGAAAATTATACATAGAGACCTAAAGGTAAGTAATATCTTGCTAGATGAGAACCTGATTCCAAAAATATCAGATTTTGGAATGGCAAGGATTTTCAAAGGAAGTGTAGATCATGCTAACACAAGAAGAGTTGTTGGAACCTATGGCTATATGTCTCCCGAATATGCAATGGAAGGATTATTTTCAGAGAAATCAGATGTGTTTAGCTTTGGAGTTATACTATTAGAGATTATAAGTGGAAGAAAAGGCTCAAGCTTTTACAACAATGAGCACTCTCTAAGCCTTTTAGGATTTGCATGGAAATTATGGAATGAAGAAAACATTGTACAGCTAATAGATCCTGATTTATCAGATCACAACCTGGAGAAGGATGTATTGAGGTGCATACACATAGGACTTCTATGTGTACAAGACCTGGCGATTGAGAGGCCAAGTATGAGCACTGTAGTTTCTATGCTTAACAGTGAGATTGTCAATCTTCCTCCTCCAAGGCAACCTGCATTCATCCAATGGCAGAGTATATTGAATCAATTGAACCCACAAGAAACTGAACGATTATTCTCCAACAACGAAGTTAGTATTAGTGACATTCAGGGCAGATAG 3156 0.4018 MDRLTQFSMFLIAVLQFISGVTSTEFTVINKCNYTVWPGISSAAGNNDNPLSTTGFVLKTGESRIISVPTPWNGRFWGRTQCTQDSTERNFYCLTGDCGSGKLECQGRGGTLPMTLIEIAVGQPDGLDFYDVSLVDGFNVPVAVVPHGGCGSCKSTYCLADMISLCPSELRVLNKDGKVVACNGPCEADGSSQTCGNNPSAPSSYAQLFKSVCQRAYSYPQDYQLSTYTCEGADYNITFCESPYTNLETSDSPSCTETVTSSLYIKDPDTISSKGGLFTLGFFSPGNSTNRYVGIWYMSKSTIVWVANRNRPLRDTSGTVRISEDGNLVVLDGQNQTIWSSYVSNISSTTSFQILDSGNLVLIDNMNNTVWQSFEHPSDSLLPRMKITSNKRTGEKQKLTAWTNQSDPTLGNFSLSLEQLNFAELFIWNATSPFWRSGPWNDQELSTVLKLSSENDNGAEEMVVSLSNGPDIKEIVVLNPMGKLLHKQWDDTKRQWQETNLVQNSDCDVYGICGEFGICNSKHAPICSCLSGFEPRNREEWNRQNWAGGCVRKSPLQCEKDKNGSSSGKEDTFLLLQNAKAPDLGEQSSNSEDKCRIQCLENCTCKAYSYDSVLGCMTWKENLIDIQQFSNGGNGLYIRAAYSDFDKKRHRTLIIIIIAVIATIIISVACACFLWKWKAKHSGKWNSKQFLFKRHGANVDKTSGNTIGQLSEAKFQELLVYNFEKVAMATNNFQLTNKLGEGGFGPVYKGTLQDGQDVAVKRLSRASGQGHEEFMNEMVVISRLQHRNLVKLLGCCIEREEKMLIYEYMPNRSLDAVIFDPTKRKLLDWGKRFVIIEGVARGVLYLHRDSRVKIIHRDLKVSNILLDENLIPKISDFGMARIFKGSVDHANTRRVVGTYGYMSPEYAMEGLFSEKSDVFSFGVILLEIISGRKGSSFYNNEHSLSLLGFAWKLWNEENIVQLIDPDLSDHNLEKDVLRCIHIGLLCVQDLAIERPSMSTVVSMLNSEIVNLPPPRQPAFIQWQSILNQLNPQETERLFSNNEVSISDIQGR 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1003 1051 Pfam Thaumatin family 30 240 IPR001938 -
Acco03g1003 1051 CDD B_lectin 262 377 IPR001480 -
Acco03g1003 1051 ProSiteProfiles Thaumatin family profile. 23 240 IPR001938 -
Acco03g1003 1051 Gene3D - 252 374 IPR036426 -
Acco03g1003 1051 PRINTS Pathogenesis-related protein signature 231 240 IPR001938 -
Acco03g1003 1051 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Acco03g1003 1051 PRINTS Pathogenesis-related protein signature 128 144 IPR001938 -
Acco03g1003 1051 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Acco03g1003 1051 Gene3D Phosphorylase Kinase; domain 1 708 808 - -
Acco03g1003 1051 Gene3D Transferase(Phosphotransferase) domain 1 809 1010 - -
Acco03g1003 1051 FunFam THAUMATIN-LIKE PROTEIN 1 24 241 - -
Acco03g1003 1051 SMART blect_4 262 377 IPR001480 -
Acco03g1003 1051 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 809 1012 - -
Acco03g1003 1051 Pfam D-mannose binding lectin 302 402 IPR001480 -
Acco03g1003 1051 ProSiteProfiles Bulb-type lectin domain profile. 256 375 IPR001480 -
Acco03g1003 1051 Gene3D Thaumatin 24 240 IPR037176 -
Acco03g1003 1051 SMART serkin_6 733 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1003 1051 SUPERFAMILY Protein kinase-like (PK-like) 718 1035 IPR011009 -
Acco03g1003 1051 SUPERFAMILY alpha-D-mannose-specific plant lectins 293 408 IPR036426 -
Acco03g1003 1051 Pfam Protein tyrosine and serine/threonine kinase 734 1002 IPR001245 GO:0004672|GO:0006468
Acco03g1003 1051 ProSiteProfiles Protein kinase domain profile. 733 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1003 1051 ProSiteProfiles PAN/Apple domain profile. 558 641 IPR003609 -
Acco03g1003 1051 ProSitePatterns Serine/Threonine protein kinases active-site signature. 854 866 IPR008271 GO:0004672|GO:0006468
Acco03g1003 1051 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 253 374 - -
Acco03g1003 1051 SMART ntp_6 568 640 IPR003609 -
Acco03g1003 1051 SMART tha2 26 241 IPR001938 -
Acco03g1003 1051 Pfam PAN-like domain 568 626 IPR003609 -
Acco03g1003 1051 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 246 996 - -
Acco03g1003 1051 SUPERFAMILY Osmotin, thaumatin-like protein 25 240 IPR037176 -
Acco03g1003 1051 FunFam receptor-like serine/threonine-protein kinase SD1-8 706 808 - -
Acco03g1003 1051 CDD STKc_IRAK 739 1005 - -
Acco03g1003 1051 CDD TLP-PA 25 240 - -
Acco03g1003 1051 CDD PAN_AP_plant 555 639 - -
Acco03g1003 1051 Pfam S-locus glycoprotein domain 435 536 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1003 Acco-ChrAcco03 21466031 21470232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1003 690 1051 Receptor kinase-like Gene Family AT4G23140 51.206 1.02e-119 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g1003 PK_Tyr_Ser-Thr 6.3e-47 CL0016