Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0999 ATGTCAAGTGGATGGAGCGTAGGACATGAAGATGATGGAACTCTTTATCTGACTTACAATTTGGAAAATAATGCCGAATTTTCAGTTATGGGTTTGAGTCCACAAGGCCAACTATGGATAGCAGTGTGGAATAACAAAAGGGAGGTTTTGAGGGCGGTGAATCAATGGACTTACTGTACTCACTATGGTGAGACAGATTCCGACAGTCAGGCTCAAAGAATGATTAGTCAAGATGAAGAAGTCAAGATGGATGATCTTCCACATTTTAATTTTGAAGATCTTGTAATTGCTACGAACAATTTCCATTCATCTAACAAGCTAGGACACGGTGGCTTTGGTTCAGTATACAAGAGTTTGGATGCAATTCTATTTGATTCAGTCAGAAAGAAAGAATTAGATTGGCAAAAACGTTTTAAGATTATTGAAGGAATTTCTAGAGGTTTGCTTTATCTCCATCGAGACTCTAGAATAAAAATCATACATAGAGACTTGAAGGTTAGTAACATCTTAGTGGATGAAGAGCTAAATCCAAAAATATCTGACTTTGGATTGGCTAAAATATTTAGAAGCAATGAAGATCAAGCCAATACTAGAAGAGTGGCTGGGACATACGGCTATATATCTCCTGAATATGCAATGCAAGGGCTATTTTCCGAAAAATCAGACATTTTCAGTTTTGGAGTTTTAGTGTTAGAGATTGTTAGTGGAAGAAGTAACTGCCGATTGCATAACATGGAGAAGGGATCTCAAACCCTTTTAGGATATGTATGGGGGCTATGGAATGAAAATAACCTGGTGTCTTTTATAGATTCAGAAATGCAATATCAAGGTTCTTATGAGGATATTTTGCGGTGTATACACATAGGCCTACTTTGTGTGCAAGAATCAGCAAAAGAGCGGCCAACTATGGCTAATATAGTGTCTATGCTTAGCAGTGAGATTGCCAATCTTCCTATTCCAAGGCAACCTGCATATATACTAAATGAGATGGGATTCAATCATGAGTCCACTTCAGAAACACTGGGTTTGCACTCTGCTAATTTTGTTAGCATTACTGATGTCAGTGGGAGATAA 1074 0.378 MSSGWSVGHEDDGTLYLTYNLENNAEFSVMGLSPQGQLWIAVWNNKREVLRAVNQWTYCTHYGETDSDSQAQRMISQDEEVKMDDLPHFNFEDLVIATNNFHSSNKLGHGGFGSVYKSLDAILFDSVRKKELDWQKRFKIIEGISRGLLYLHRDSRIKIIHRDLKVSNILVDEELNPKISDFGLAKIFRSNEDQANTRRVAGTYGYISPEYAMQGLFSEKSDIFSFGVLVLEIVSGRSNCRLHNMEKGSQTLLGYVWGLWNENNLVSFIDSEMQYQGSYEDILRCIHIGLLCVQESAKERPTMANIVSMLSSEIANLPIPRQPAYILNEMGFNHESTSETLGLHSANFVSITDVSGR 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0999 357 ProSiteProfiles Protein kinase domain profile. 24 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0999 357 SMART serkin_6 101 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0999 357 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 49 117 - -
Acco03g0999 357 ProSitePatterns Protein kinases ATP-binding region signature. 107 129 IPR017441 GO:0005524
Acco03g0999 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Acco03g0999 357 Pfam Protein tyrosine and serine/threonine kinase 128 310 IPR001245 GO:0004672|GO:0006468
Acco03g0999 357 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 115 318 - -
Acco03g0999 357 Gene3D Transferase(Phosphotransferase) domain 1 116 317 - -
Acco03g0999 357 SUPERFAMILY Protein kinase-like (PK-like) 85 341 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0999 Acco-ChrAcco03 21363784 21366172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0999 88 357 Receptor kinase-like Gene Family AT4G23280 47.569 9.88e-84 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g0999 PK_Tyr_Ser-Thr 8.3e-27 CL0016