Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0995 ATGGACGATGAGGGGCAATTGAAAGATGGACAACTAATTGCAATTAAGAGACTTTCAAAAGCATCAAGACAAGGGCAAGAAGAACTCATGAATGAGGTTGCAGTAATTTCAAAGCTTCAACATCGGCAATTTTCTGAAAAATCAGATGTTTTTAGTTTTGGAGTTCTATTGCTTGAGATTGTTAGTGGGAGGAGCAACTCTAGATTCTATAACATGGAAGGATGTCAAACCCTGCTAGGATATGTATGGAAATTATGGAATGAAGAAAAACTTGGGTCCTTTATAGATTCAGATATACACTATCAAGGTTCTTGTGATGAGATGTTGCGGTGTGTACATATAGGACTTCTTTGCGTGCAAGAACTAGCAAAAGAGCGACCAACTATGGACAATGTAGTGTCTATGCTTAACAGTGAGATTCTAAATCTTCCTCTTCCAAAGAAACCTTCATATGTACTAAATGAGAAGGGATTTAATTCAGAGTCCTCTTCACAAACACAGACTTTGCACTCTCCTAACATTGCCAGCATCACTGATGTAATTGGGAGATAA 552 0.3786 MDDEGQLKDGQLIAIKRLSKASRQGQEELMNEVAVISKLQHRQFSEKSDVFSFGVLLLEIVSGRSNSRFYNMEGCQTLLGYVWKLWNEEKLGSFIDSDIHYQGSCDEMLRCVHIGLLCVQELAKERPTMDNVVSMLNSEILNLPLPKKPSYVLNEKGFNSESSSQTQTLHSPNIASITDVIGR 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0995 183 Gene3D Transferase(Phosphotransferase) domain 1 44 174 - -
Acco03g0995 183 Pfam Protein tyrosine and serine/threonine kinase 39 136 IPR001245 GO:0004672|GO:0006468
Acco03g0995 183 Gene3D Phosphorylase Kinase; domain 1 3 43 - -
Acco03g0995 183 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 42 - -
Acco03g0995 183 SUPERFAMILY Protein kinase-like (PK-like) 43 173 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0995 Acco-ChrAcco03 21211050 21212504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0995 4 42 Receptor kinase-like Gene Family AT4G23140 53.846 4.45e-08 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g0995 PK_Tyr_Ser-Thr 3.4e-07 CL0016