Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0993 ATGAATCAGCTAATTATATTGGTTTTGTCTTTATCAACATTTCTCCTATCCATATCAGGAGTGACTTCAACAACATTCACCGTAGTTAACAACTGCAACTACACAATATGGCCAGCCATTGTTTCACATGGTGGTGTCTCTAATATTTCTCCCACCGGTTTTGTTCTTGCTAAGGGAGTGTCTAGGACATTCTCTGTACCCACTTCATGGAGCGGCAGCTTGTGGGGTCGAACAAACTGCGCAATGAACTCCACTGGAACCTTTCGCTGTGGGACCGGCGATTGCGGCTCCGGGAAGCTGGATTGCGAGGACAAGGGCAGCGAAGAGCTTGCTACAACAATAGAATTCAGTTTAGGCGAAGCGGGAGACCTTGATTCATATTATGTGAACTTAGTAAACGGATACAACGTGCCCATGATGGTTTCTCCTCAAGGCATGAAAAACTGCTACAGTACAGGTTGTACAGAGGATTTAAACACTATATGCCCTCCAGAGCTCAGTGTAGTTTTCAGCAAAAATGGAAAAATGGCGGGATGCCAAAATGCTTGCAAGTCATTAAAGCCCCCACTGTACTGTTCAAAACCAAACCATTACTCAGAGATATTTGACACTGCATGCCCATATGCCCATTTTTTACCCAACAATAGCAAGGAAAAAGCAGTCACATGCCCGGCCGCACCAATTTATAGCATAAGCTTTTGCAATCCATCACCCAACCCAGACAAGAGACATTTGATATTCATCATTGTCATTACTATTATTATAGGAGCTATCATTATTAATGGCACTTGTGCATACTTTTTCAGAAAATGGATCGCAAAACATTCAGCAAGAATATGGAAGACCATATGCTTCTTGTTGTTAAAAAAGCATGGATCATATGTAGAGAAAACAAGTGAAAGCAACATTATTGGAGAATTTTCAACAGTAAAATTCCCCCAGGAGTTATTTGTGTATGACTTTAACAAGGTTGCAATTGCCACAAACAACTTTCACTTATCTAATAAACTTGGACAGGGCGGTTTTGGTCTAGTATATAAGGGAACATTACCACATGGTCAGCATGTAGCAATTAAGAGACTATCCAGAGCATCTGGACAGGGACAAGAAGAATTTATGAATGAGATGGTTGTCATTTCGAAGCTTCAACATCGGAATCTTGTAAGACTTTTAGGTTGTTGTGTTGAAGGAGAAGAAAAGATGTTGATCTATGAATACATGCCAAATAAAAGTTTGGATGCATTTATTTTTGATCCGTCAAATCGTAAACTACTCGATTGGGGAAAGCGCTTTGGCATAATTGAAGGAATAGCTCGTGGAGTACTTTATCTTCATAGAGATTCTAGACTAAAAATTATACATAGGGATCTAAAGGCAAGTAATATATTGCTAGATGAAAATCTTATTCCAAAAATATCAGATTTTGGTATGGCTAGAATTTTTACAGAGAGTGAAGATCATGCTAATACAAAAAGAGTTGTTGGAACCTATGGTTATATGTCTCCAGAATATGCAATGGAAGGATGCTTTTCAGAGAAATCAGATGTGTTTAGTTTTGGCGTCCTTCTATTAGAGATTATTAGTGGAAGAAAAAACTCTAGCTTTTATCACAATGAGCATTCTTTAAGCCTTTTAGGATTTGCTTGGAAATTATGGAATGAAAAGAACCTTTCATTGTTAATTGATAATGAAATATCCAATCCAAGTCTAGAGAAGGATATATTAAGGTGCATACACATAGGGCTTTTATGTGTGCAAGACCTTGCAAGTGAGAGGCCAAATATGAGCATTGTGATTTCTATGTTGAATAGTGACATTGTTAGTCTACTTCCTCCAAGGCAACCTGCGTTTATCCAGTGGCAGAGTAAAGTGAATAATGTGCCTATAGAAGAAAACGAAGCAATACTTTCCAACAATGGACTCAGTATCAGTGAGATACGGGGCAGATAG 1950 0.3872 MNQLIILVLSLSTFLLSISGVTSTTFTVVNNCNYTIWPAIVSHGGVSNISPTGFVLAKGVSRTFSVPTSWSGSLWGRTNCAMNSTGTFRCGTGDCGSGKLDCEDKGSEELATTIEFSLGEAGDLDSYYVNLVNGYNVPMMVSPQGMKNCYSTGCTEDLNTICPPELSVVFSKNGKMAGCQNACKSLKPPLYCSKPNHYSEIFDTACPYAHFLPNNSKEKAVTCPAAPIYSISFCNPSPNPDKRHLIFIIVITIIIGAIIINGTCAYFFRKWIAKHSARIWKTICFLLLKKHGSYVEKTSESNIIGEFSTVKFPQELFVYDFNKVAIATNNFHLSNKLGQGGFGLVYKGTLPHGQHVAIKRLSRASGQGQEEFMNEMVVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNKSLDAFIFDPSNRKLLDWGKRFGIIEGIARGVLYLHRDSRLKIIHRDLKASNILLDENLIPKISDFGMARIFTESEDHANTKRVVGTYGYMSPEYAMEGCFSEKSDVFSFGVLLLEIISGRKNSSFYHNEHSLSLLGFAWKLWNEKNLSLLIDNEISNPSLEKDILRCIHIGLLCVQDLASERPNMSIVISMLNSDIVSLLPPRQPAFIQWQSKVNNVPIEENEAILSNNGLSISEIRGR 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0993 649 Gene3D Phosphorylase Kinase; domain 1 291 406 - -
Acco03g0993 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Acco03g0993 649 CDD STKc_IRAK 337 603 - -
Acco03g0993 649 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Acco03g0993 649 PRINTS Pathogenesis-related protein signature 225 234 IPR001938 -
Acco03g0993 649 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Acco03g0993 649 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Acco03g0993 649 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 205 645 - -
Acco03g0993 649 ProSitePatterns Thaumatin family signature. 86 102 IPR017949 -
Acco03g0993 649 Pfam Thaumatin family 30 234 IPR001938 -
Acco03g0993 649 SMART serkin_6 331 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0993 649 Pfam Protein tyrosine and serine/threonine kinase 332 599 IPR001245 GO:0004672|GO:0006468
Acco03g0993 649 Gene3D Thaumatin 24 235 IPR037176 -
Acco03g0993 649 Gene3D Transferase(Phosphotransferase) domain 1 407 608 - -
Acco03g0993 649 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 296 406 - -
Acco03g0993 649 SUPERFAMILY Osmotin, thaumatin-like protein 24 234 IPR037176 -
Acco03g0993 649 SMART tha2 26 235 IPR001938 -
Acco03g0993 649 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 407 610 - -
Acco03g0993 649 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
Acco03g0993 649 SUPERFAMILY Protein kinase-like (PK-like) 314 631 IPR011009 -
Acco03g0993 649 ProSiteProfiles Protein kinase domain profile. 331 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0993 649 ProSiteProfiles Thaumatin family profile. 23 234 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0993 Acco-ChrAcco03 21187695 21190242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0993 284 634 Receptor kinase-like Gene Family AT4G23140 53.501 8.63e-125 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g0993 PK_Tyr_Ser-Thr 3.8e-50 CL0016