Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0987 ATGGGAGGAGAGGAAGGGAGTATCGAACTTTCTTTTACAGCTGATTCCCTTTGGACTTTTACCTTAGATTCTCAAGGAAAAGGAGAACAAAGACGTTGGGATTCCCAGGAAAATATATGGGAACTTAAGAGGATAATTGGTTCTTCAGACTGTGATGTTTATGATTTACTTGACATACAGAGCATGCCGGATGGAGGGGTTGATGTATACATACGTTTAGCCAACTCAGAACTAGGCAAAGGCGGGAGGAAAATGAAAACACCTATTATAATATCAGTTTTGTTTGGAACAATTCTCATCACTGTATTTGGATATTTCTTATGGAAAAAATGCTCAACGCAAAAAGGGAAAATGAATATGCAATCTGAAGACGAAAGAAGGATTATGCACCTGAAGCAAGTCCATATTCCAGAGCTATCATTGTTTGATTTGAAAGAGTTGGCAGCTGCAACAAACAACTTTGACATAGCAAATAAACTTGGGCAAGGTGGCTTTGGTCCAGTTTATAAGGGAAAATTGGAAGATGGGCAGGAAATAGCAGTAAAAAGACTATCAAGATCATCTGGACAGGGTATGGACGAATTTATAAATGAAGTGGAATTGATTTCTAAGCTTCAACACCGAAATCTTGTTAGACTTCTTGGCTGTTGCATTGAAGGAGAAGAGATATTGGTTTATGAATACATGCCAAACAAAAGTTTGGATTTCTATATCTTTGACACCCTCCAACGAAAATCCTTTGATTGGGAGAAGCGCTTCAACATAATTGAGAGAATAGCGAGAGGTTTGCTTTATCTTCACAGAGACTCAAGATTAAAAATTATACATAGAGATTTGAAGGCAAGTAACATATTATTGGATAAAGAAATGAATCCCAAGATATCAGATTTTGGGATGACTAAATTGTTCGGAGGCAATCAAGATAAGGCAAATACAGAAAGAATTGTTGGAACATACGGCTACATTTCTCCCGAGTATGCAACTGAAGGACTCTATTCCGAGAAATCTGATGTGTTTAGCTTTGGTGTTTTGTTGCTAGAAATTGTTAGTGGAAGGAAAAACACCAGTTTTTATGAAGAGGCAGAATCTTTGACACTTTTAGGATTTGTATGGAAATTATGGATTGATGGCATTGTTATACCTCTAATAGATCCACAGATATATGACCCAAGCTTTCACAACGATATATTGAGGTGTATACATATAGGTCTTTTGTGTGTTCAAGAACTTGCAAAAGACAGGCCCTCTATGGCATCTGTAATGTCAATGCTTCAAAGTGAGATGATGGATATTCCTCCCCCAAGCCAACCGGCATTCATCCTCAGGCAGGCTATGTCTTTTGCAGCAGAGCGAGCTCTAGACAATAATGAGTCACGTTCCATAAATGGTGTAACTATTTCAGATTTTAAAGGTAGATAG 1419 0.3784 MGGEEGSIELSFTADSLWTFTLDSQGKGEQRRWDSQENIWELKRIIGSSDCDVYDLLDIQSMPDGGVDVYIRLANSELGKGGRKMKTPIIISVLFGTILITVFGYFLWKKCSTQKGKMNMQSEDERRIMHLKQVHIPELSLFDLKELAAATNNFDIANKLGQGGFGPVYKGKLEDGQEIAVKRLSRSSGQGMDEFINEVELISKLQHRNLVRLLGCCIEGEEILVYEYMPNKSLDFYIFDTLQRKSFDWEKRFNIIERIARGLLYLHRDSRLKIIHRDLKASNILLDKEMNPKISDFGMTKLFGGNQDKANTERIVGTYGYISPEYATEGLYSEKSDVFSFGVLLLEIVSGRKNTSFYEEAESLTLLGFVWKLWIDGIVIPLIDPQIYDPSFHNDILRCIHIGLLCVQELAKDRPSMASVMSMLQSEMMDIPPPSQPAFILRQAMSFAAERALDNNESRSINGVTISDFKGR 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0987 472 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 117 228 - -
Acco03g0987 472 CDD STKc_IRAK 160 425 - -
Acco03g0987 472 ProSiteProfiles Protein kinase domain profile. 154 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0987 472 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 83 468 - -
Acco03g0987 472 Pfam Protein tyrosine and serine/threonine kinase 156 358 IPR001245 GO:0004672|GO:0006468
Acco03g0987 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 274 286 IPR008271 GO:0004672|GO:0006468
Acco03g0987 472 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 229 432 - -
Acco03g0987 472 SMART serkin_6 154 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0987 472 SUPERFAMILY Protein kinase-like (PK-like) 139 445 IPR011009 -
Acco03g0987 472 Gene3D Transferase(Phosphotransferase) domain 1 229 431 - -
Acco03g0987 472 Gene3D Phosphorylase Kinase; domain 1 112 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0987 Acco-ChrAcco03 20969388 20972400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0987 76 442 Receptor kinase-like Gene Family AT4G05200 51.220 1.97e-128 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g0987 PK_Tyr_Ser-Thr 2.8e-46 CL0016