Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0985 ATGTTCACGCTGGGATTCTTCAGACCTCGGAATTCCACAAATCGCTACCTAGGAATTTGGTTTATGTCTGAATCCTCTGTTGTTTGGGTGGCTAACAAAAACGACCCACTAAAAGATTCTTCTGGGATTCTCACAATATCAAGGAATGGCAATCTTGTTGTTTTGAATGGGCAAAAGCACGTTGTTTGGTCAACAAATGTCTCAATAGCATCAAATTCTAGTGCTCAACTCTTAGATTCTGGCAACCTTGTACTCATTGATAAAACTACTGGGGCATTCCTGTGGCAGAGTTTCCAGCATCCTGATAATACATTACTACAGAACATAAAATTCAGTACTAATAAAAAAACAGGCGAGAAAATGCAACTTACATCATGGAAAAGTACATCTGATCCATCCTATGGAGGATTTTCTTGCAGCCTTGAGCCTCGTAATGTTACTGAACTGTTTGTATGGAAGGAAAATCAGCCTTATTGGCGTAGCGGTCCCTGGAATGGCACACTCTTTCTTGGGGTACCTCAGAGTTCATCTAAGTCCCTAAATGAGTTTCAGATTAAAGGAGATCAGGGAGGGAGTTTTGACCTATATTTTCATTACACAGACAAGTCTGCATTGCTAACTCTTAAGTTAGGTCATAAAGGCAAACTAAAAACAGAACGTTGGAATTCTCATACAAAATTATGGGAACGTGAGTGGAGCTTCTCAGTTGGAGAAGTTGATCTTTTCATACGTTTGGCCAACTCAGAACTAGGTAAGGCCAGGAGGAAAATGACAAAACCTATTATAATATCAGCTCTGGTAGGAATAATTTTCATGATGGCCTTTGGATATTTCTTATGGAAAAGAAAGTCAAAGCAAAAAGGGGAAACGCAGATGCAGATTCTTGACAGAAGAAGGATTTCAAACTTGAAGCAAGCTCATAATCAAGACTTATCATTGTTTGATTTTAGAAAGTTGGCAATTGCAACAAACAACTTTGACTTAGCAAATAAACTTGGGCAAGGTGGTTTTGGTCCAGTTTACAAGGGGAAGTTTGAAGATGGACAAGAAATAGCAGTAAAAAGACTATCAAGATCATCTGGGCAGGGTATTGAAGAATTTATTAATGAAGTGGAGTTGATTTCTAAGCTTCAACACCGAAATCTAGTTAAACTTCTTGGTTGTTGCATCGAAAGAGATGAAGAGATATTGGTTTATGAATATATGACAAACAAAAGTTTGGATGCATATATCTTTGACCCACTGCAACAAAATAACTTAGATTGGGAAAGGCGCTTCAACATAATTGAAGGAATAGCTAGAGGATTACTCTATCTTCATAGAGATTCAAGATTAAGAATTATACATAGAGATTTGAAAGCGAGTAACATATTGTTGGATGAAGGGATGAATCCAAAGATATCAGATTTTGGAATGTCAAAACTTTTGGGAGGTGGCCAAGATCAAGCAAATACAGAAAGAATTGTTGGAACATATGGGTACATTTCTCCAGAATATGCAACTGAAGGACTCTATTCAGAGAAATCTGATGTCTTTAGTTTTGGTGTTTTGCTACTAGAGATTATTAGTGGAAGAAAAAACACGAGCTTTTATGAAGATGCAGAATATTTGACACTTTTAGGATTTGCATGGAAATTATGGATTAATGCAAATGTTTTACCTCTAATAGATCCACAAATATATGATCCAAACTTTCACCAGGATATACTGAGGTGCACACATATAGGTCTTCTATGTGTACAAGAACTTGCAAAAGATAGGCCCACTATGGCCTCTGTAATGTCAATGCTTCAAAGCGAGATAGTTGATATTCCTCCTCCAAGCCAACCTGCATTCATCCTCAGGCAGACTATGTCTCATGCAACAGAACAAACTCCAAGCAATAATGGATTATGTTCCATCAATAAAGTAACTATCTCAAATTTTGTGGGGAGATAG 1938 0.3741 MFTLGFFRPRNSTNRYLGIWFMSESSVVWVANKNDPLKDSSGILTISRNGNLVVLNGQKHVVWSTNVSIASNSSAQLLDSGNLVLIDKTTGAFLWQSFQHPDNTLLQNIKFSTNKKTGEKMQLTSWKSTSDPSYGGFSCSLEPRNVTELFVWKENQPYWRSGPWNGTLFLGVPQSSSKSLNEFQIKGDQGGSFDLYFHYTDKSALLTLKLGHKGKLKTERWNSHTKLWEREWSFSVGEVDLFIRLANSELGKARRKMTKPIIISALVGIIFMMAFGYFLWKRKSKQKGETQMQILDRRRISNLKQAHNQDLSLFDFRKLAIATNNFDLANKLGQGGFGPVYKGKFEDGQEIAVKRLSRSSGQGIEEFINEVELISKLQHRNLVKLLGCCIERDEEILVYEYMTNKSLDAYIFDPLQQNNLDWERRFNIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEGMNPKISDFGMSKLLGGGQDQANTERIVGTYGYISPEYATEGLYSEKSDVFSFGVLLLEIISGRKNTSFYEDAEYLTLLGFAWKLWINANVLPLIDPQIYDPNFHQDILRCTHIGLLCVQELAKDRPTMASVMSMLQSEIVDIPPPSQPAFILRQTMSHATEQTPSNNGLCSINKVTISNFVGR 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0985 645 Gene3D Transferase(Phosphotransferase) domain 1 402 603 - -
Acco03g0985 645 ProSiteProfiles Protein kinase domain profile. 326 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0985 645 SUPERFAMILY alpha-D-mannose-specific plant lectins 17 132 IPR036426 -
Acco03g0985 645 CDD STKc_IRAK 332 598 - -
Acco03g0985 645 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 290 401 - -
Acco03g0985 645 Gene3D - 1 100 IPR036426 -
Acco03g0985 645 Pfam Protein tyrosine and serine/threonine kinase 328 596 IPR001245 GO:0004672|GO:0006468
Acco03g0985 645 Pfam S-locus glycoprotein domain 159 241 IPR000858 GO:0048544
Acco03g0985 645 SMART serkin_6 326 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0985 645 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 44 640 - -
Acco03g0985 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Acco03g0985 645 SUPERFAMILY Protein kinase-like (PK-like) 309 597 IPR011009 -
Acco03g0985 645 ProSiteProfiles Bulb-type lectin domain profile. 1 98 IPR001480 -
Acco03g0985 645 SMART blect_4 1 101 IPR001480 -
Acco03g0985 645 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 402 605 - -
Acco03g0985 645 Gene3D Phosphorylase Kinase; domain 1 285 401 - -
Acco03g0985 645 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 98 - -
Acco03g0985 645 Pfam D-mannose binding lectin 27 127 IPR001480 -
Acco03g0985 645 CDD B_lectin 2 101 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0985 Acco-ChrAcco03 20960347 20964005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0985 261 615 Receptor kinase-like Gene Family AT4G23190 50.975 2.43e-125 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g0985 PK_Tyr_Ser-Thr 1.1e-47 CL0016