Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0977 ATGAAGCTCTCTTCTGCAAAAGACCGAATTCTGATCGTTATCCCTCTGCTTCATCTCTTGGTGCTTCATCCTTCTTGTCACTCCCTTACGAGAATAACCCCAAGCCAACCCCTCAAAGACGGCGACGTTTTGGCCTCGGATGGAGGAACCTTTGCCCTCGGTTTCTTCTCCCCCAGCAACAACTCAAGAAAGCGCTATGTTGGAATATGGTATAATAGATCCTCCAAACCAACCGTTGTTTGGGTTCTTAATAGACAGAATCCTCTTTATGATAACTCCGGAGTTCTTTCGATTAACACCCAGGGAAACATCGTTCTTGTTTATAATGATACCCATTTGAAAAGAAATAGCTCCATTTGGTCTTCCAATGTTTCGACCCCATCTTCTAGTCACACCTTTGCTAAGCTTCAAGACACCGGAAACTTGGTTTTGATCCGAAACCAAGGTACACGAAAGGTTATGTGGCAGAGTTTTGACTATCCTGGTGATACATCGCTTCCATTCATGAAAATTGGGGTTGACCGGAAAACCGGTTTTAATCGGTTCCTCACATCATGGAAATCTCCAGACGACCCAGGATTGGGAAACGTGACTCACATGATTGATCCAATAGGTTATCCTCAACTATTCATTTATAAAAATGGAGCTCCATTTTGGCGGGGTGGTTCGTGGACTGGTCAAAGATGGAGTGGTATACCTGCAATGACACCCAACTTCATCTTCAATGTCACCTTTGTTGACAATGCGGATGAAGTTAGTCAGGTGACTCAAGTTGTAGATCCTTCAGTTTTCTTAAGAATGGTGTTAGACAACACTGGTCATGAGACAAGAACTATTTGGCAAGCTAAGGAAAAAAGATGGCTCCAAGTATGGTATGGTCCGACAGAGGACTGTGACCATTATCGCTGGTGTGGATCAAATAGTAAGTGTGACCCATATAATGGGGACAAGTTTGAGTGCGTGTGCTTGCCGGGATTCGAACCCAAGAACCTGCAAGAGTGGAATATGAAAAATGGGTCGAGCGGGTGTGTGAGGAAAAAGAATGTGTCGACGTGTCAAAGCGGGGAGGGGTTTGTGAAAGTGGCACGTGTGAAGGTGCCAGATACAACAAAGGCACGTGTGGATAAGAGCGAGAGTATGAGCTTGAAAGGGTGTGAGGAGAAGTGCCTGAGAGATTGTTCTTGTGTAGCATATACGAATTTAGATGAGGTCAAACAAAGTGGCTGCTTGACGTGGCATGCTGATATGGAAGACATCAGAACATTTGACAATGTGGGCCAAGATTTGTACGTGCGTGTGGATGCACATGAATTGGGTAAATATGGAAGGAAGAAGCATTATGGTTCTCTGGGCAAGGAGGGCATGGTGACACTCGTAGTCATTTCTATTTGCCTAATAACTTTCCTGGTGATTTCTTTAGTGCATTGGTTTGTAAAGTACAATAGTCAAGCAAAAAGATTGCACAAAGAATATTTGTTTGATGGAGAAAACAATTCCGATGTAACTCTCTTCGATCTAGATGACATAGTTGAGGCAACAGACAATTTCTCAGACACTAATATGCTTGGAAATGGTGGTTTCGGTTCTGTATATAAGGGTCTTCTCAAAGATGAAATGGAAATAGCAGTTAAGAGGCTATCAAAGTATTCTGGACAAGGCATTGAAGAATTCAGAAATGAGGTTACTTTAATTGCAAAGCTCCAACACAGAAATCTTGTGAGGATCTTAGGTTGTTGCATAGATGGAGGAGAGAAGATGTTGATATATGAATATTTGCCAAACAAAAGCTTGGACTCTTTCATTTTTGATCAAGCAAAAAGATTACAATTAGATTGGAGGAAAAGATTTGACATCATTTGTGGAGTGGCAAGGGGAATTTTATACCTTCATCAAGATTCAAGATTACGTATAATTCATAGAGACTTGAAGGCTAGCAACATTTTGTTAGATTCCACAATGAATCCAAAAATTGCAGATTTTGGCATGGCAAGAATATTTGGTGGAGACCAAACTGAAGCAAACACAAACCGTGTTGTTGGAACCTATGGTTATATGTCACCAGAATATGCAATGGAAGGAATTTTCTCAATAAAATCAGATGCATATAGCTTTGGAGTATTACTTTTGGAGATTGTGACTAGCAAAAAAAATAGTGGTCATTATGACGACGTTTCTTCTACTTTGGTTGGACACATTTGGAACCTTTGGAGAGAAAGTAGAGTTATGGAGATTGTTGATCCATCATTAATAGGTGAAACATGCCCTAAATATGAAGTTCTGAAATGTATCCAGATTGGACTTTTATGTGTGCAAGAATATGCAACAGATAGGCCAACCATGTTAGAAGTTGTTTCCATGTTGGATAATGACTCGACTCTTGCTCCTCCAAAGCAACCAGCATTTCTTTTCAAGAAAACCAAGTGCAATGATCCAACTTTGTCAATCAGTGAAGGGATCAATTCAATAAATGAGATGAGTACTACTGTGGTTGAAGCTCGTTGA 2502 0.4093 MKLSSAKDRILIVIPLLHLLVLHPSCHSLTRITPSQPLKDGDVLASDGGTFALGFFSPSNNSRKRYVGIWYNRSSKPTVVWVLNRQNPLYDNSGVLSINTQGNIVLVYNDTHLKRNSSIWSSNVSTPSSSHTFAKLQDTGNLVLIRNQGTRKVMWQSFDYPGDTSLPFMKIGVDRKTGFNRFLTSWKSPDDPGLGNVTHMIDPIGYPQLFIYKNGAPFWRGGSWTGQRWSGIPAMTPNFIFNVTFVDNADEVSQVTQVVDPSVFLRMVLDNTGHETRTIWQAKEKRWLQVWYGPTEDCDHYRWCGSNSKCDPYNGDKFECVCLPGFEPKNLQEWNMKNGSSGCVRKKNVSTCQSGEGFVKVARVKVPDTTKARVDKSESMSLKGCEEKCLRDCSCVAYTNLDEVKQSGCLTWHADMEDIRTFDNVGQDLYVRVDAHELGKYGRKKHYGSLGKEGMVTLVVISICLITFLVISLVHWFVKYNSQAKRLHKEYLFDGENNSDVTLFDLDDIVEATDNFSDTNMLGNGGFGSVYKGLLKDEMEIAVKRLSKYSGQGIEEFRNEVTLIAKLQHRNLVRILGCCIDGGEKMLIYEYLPNKSLDSFIFDQAKRLQLDWRKRFDIICGVARGILYLHQDSRLRIIHRDLKASNILLDSTMNPKIADFGMARIFGGDQTEANTNRVVGTYGYMSPEYAMEGIFSIKSDAYSFGVLLLEIVTSKKNSGHYDDVSSTLVGHIWNLWRESRVMEIVDPSLIGETCPKYEVLKCIQIGLLCVQEYATDRPTMLEVVSMLDNDSTLAPPKQPAFLFKKTKCNDPTLSISEGINSINEMSTTVVEAR 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0977 833 Gene3D Transferase(Phosphotransferase) domain 1 592 797 - -
Acco03g0977 833 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 20 778 - -
Acco03g0977 833 ProSiteProfiles Protein kinase domain profile. 516 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0977 833 SMART serkin_6 516 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0977 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 592 795 - -
Acco03g0977 833 CDD STKc_IRAK 522 789 - -
Acco03g0977 833 Gene3D - 27 158 IPR036426 -
Acco03g0977 833 CDD PAN_AP_plant 350 433 - -
Acco03g0977 833 Pfam S-locus glycoprotein domain 219 330 IPR000858 GO:0048544
Acco03g0977 833 SMART ntp_6 353 433 IPR003609 -
Acco03g0977 833 Pfam PAN-like domain 352 419 IPR003609 -
Acco03g0977 833 ProSitePatterns Protein kinases ATP-binding region signature. 522 544 IPR017441 GO:0005524
Acco03g0977 833 SUPERFAMILY Protein kinase-like (PK-like) 498 787 IPR011009 -
Acco03g0977 833 CDD B_lectin 35 161 IPR001480 -
Acco03g0977 833 PIRSF SRK 4 833 IPR024171 GO:0004674
Acco03g0977 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 192 IPR036426 -
Acco03g0977 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 481 591 - -
Acco03g0977 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Acco03g0977 833 Pfam Protein tyrosine and serine/threonine kinase 520 787 IPR001245 GO:0004672|GO:0006468
Acco03g0977 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 158 - -
Acco03g0977 833 Gene3D Phosphorylase Kinase; domain 1 477 591 - -
Acco03g0977 833 SMART blect_4 35 161 IPR001480 -
Acco03g0977 833 Pfam D-mannose binding lectin 78 187 IPR001480 -
Acco03g0977 833 ProSiteProfiles PAN/Apple domain profile. 352 434 IPR003609 -
Acco03g0977 833 ProSiteProfiles Bulb-type lectin domain profile. 29 157 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0977 Acco-ChrAcco03 20674553 20679625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0977 504 833 Receptor kinase-like Gene Family AT4G11530 57.692 6.14e-126 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g0977 PK_Tyr_Ser-Thr 6.2e-48 CL0016