Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0976 ATGTTCTTGTATGCAGCTAAATATGGAAGGAAGAAGCATTATGGTTCTCTGGGCAAGGAGGGAATGGTGACACTCGTAGTCATTTCTATGTGCCTAATAACATTCCTGGTGATTTCTCTAGTGTATTGGTTTGTAACGTACAATAACCAAGCAAAAAGGTTGCACAAAGAATATTTGTTTGATGGAGAAAACAATTCCGATGTAACTCTCTTTGATCTAAAGGACATAGTTGAGGCAACAAACAATTTCTCAGACACTAATATGCTTGGAAAAGGTGGTTTCGGTTCTGTATATAAGGGTCTACTTAAAGATGGAATGGAAATAGCAGTTAAGAGGCTATCAAAGTATTCTGGACAAGGCATTGAAGAATTCAGAAATGAGGTTACTTTAATTGCAAAACTCCAACACAGAAATCTTGTGAGGATCTTAGGTTGTTGCATAGATGGAGAAGAGAAGATGTTGATATATGAATATTTGCCAAACAAAAGCTTAGACTCGTTCATTTTTGAATATGCAATGGAAGGAATTTTCTCAATAAAATCAGATGCATATAGCTTTGGAGTATTACTTTTGGAGATTATTACTAGCAGAAAAAATAGTGGTCATTATGACGATGTTTCTTCTACTTTAGTTGGACATATTTGGAACCTTTGGAGAGAAAGTAGAGTTATGGAGATTGTTGATCCATCATTAATCAGTGAAACATGCCCTAAATATGAAGTTATGAAATGTATCCAAATTGGACTTTTATGTGTGCAAGAATATGCAACAGATAGGCCAACTATGTTGGAAGTTGTTTCCATGTTGGATAATGACTCGACTCTTGCTCCTCCAAAGCAACCAGCATTTCTTTTCAAGATAACTAAGTGCGATGATCCAAATTTGTCAATCAGTGAAGGGGTTAATTCAATAAATGAGATGAGTACCACTCTGGTTGAAGCTCGTTGA 948 0.3586 MFLYAAKYGRKKHYGSLGKEGMVTLVVISMCLITFLVISLVYWFVTYNNQAKRLHKEYLFDGENNSDVTLFDLKDIVEATNNFSDTNMLGKGGFGSVYKGLLKDGMEIAVKRLSKYSGQGIEEFRNEVTLIAKLQHRNLVRILGCCIDGEEKMLIYEYLPNKSLDSFIFEYAMEGIFSIKSDAYSFGVLLLEIITSRKNSGHYDDVSSTLVGHIWNLWRESRVMEIVDPSLISETCPKYEVMKCIQIGLLCVQEYATDRPTMLEVVSMLDNDSTLAPPKQPAFLFKITKCDDPNLSISEGVNSINEMSTTLVEAR 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0976 315 Gene3D Phosphorylase Kinase; domain 1 45 158 - -
Acco03g0976 315 Pfam Protein tyrosine and serine/threonine kinase 87 168 IPR001245 GO:0004672|GO:0006468
Acco03g0976 315 Pfam Protein tyrosine and serine/threonine kinase 170 269 IPR001245 GO:0004672|GO:0006468
Acco03g0976 315 SUPERFAMILY Protein kinase-like (PK-like) 66 284 IPR011009 -
Acco03g0976 315 Gene3D Transferase(Phosphotransferase) domain 1 159 278 - -
Acco03g0976 315 ProSiteProfiles Protein kinase domain profile. 83 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0976 315 ProSitePatterns Protein kinases ATP-binding region signature. 89 111 IPR017441 GO:0005524
Acco03g0976 315 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 16 169 - -
Acco03g0976 315 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 48 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0976 Acco-ChrAcco03 20597500 20599817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0976 170 283 Receptor kinase-like Gene Family AT4G11490 42.735 5.56e-22 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g0976 PK_Tyr_Ser-Thr 1.9e-06 CL0016