Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0973 ATGACGACTACCACACCAGATTTCTACTGTCAAGTTTCCGATGAACCAAGTGATCCTGATGCCTTTGAAGATATACCGATCCAACGCCACAAGACTTCAATGCTAAATTTCAATATCAAACTTTGTGTTCTTTTTGCAAAAAGTTGTTCTTGTGGTCAGATTCATCTTCTTGCTATTCCCTCCATGCCAATTTCTAACCATTACATGTCTTGTAGAGAGTTTTTCCGACGTGCTTCGAGTTTTCTACGAAGCAATCTTTCGCACGATCTGATAGACCAGGAATTGCTTGACTTGTTGGTACCAGACGTTATTTCTTGCGCTCAAGAATTCTTCTATGGAAACCCTCCGTATCCTTATTTTGACGAGGATATTTTCTTGGTTTATCCTTTAGCTATTGAGGTCATCCTCGATTTGCCTGAAAACTTGGAACTTGTGCATATGTCTGATGAAATATTAATCCTATCAGAACAATCCATGCAAGAGATGCAGGAGATTAATATGGTTCCGGCATCAACAGAAGCTATTGAATCGCTAAAGAAAATAAATCTTCTAGAAAATAAAGATGTGAATGAGGATGAGAAGGAGAAGGAACAGTGTTGTATTTGTCTCGAAGATTTGGAGCAAGTTTCAACCATGACATATTGTCACCATATTTTTCACAATAATTGTATTATTCAATGGCTAAACGTTAGTCATAAGTGTCCTTTATGTCGATATCCAATGCCAAAAGCTCACCAGGACTAG 744 0.3804 MTTTTPDFYCQVSDEPSDPDAFEDIPIQRHKTSMLNFNIKLCVLFAKSCSCGQIHLLAIPSMPISNHYMSCREFFRRASSFLRSNLSHDLIDQELLDLLVPDVISCAQEFFYGNPPYPYFDEDIFLVYPLAIEVILDLPENLELVHMSDEILILSEQSMQEMQEINMVPASTEAIESLKKINLLENKDVNEDEKEKEQCCICLEDLEQVSTMTYCHHIFHNNCIIQWLNVSHKCPLCRYPMPKAHQD 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0973 247 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 91 242 - -
Acco03g0973 247 SMART ring_2 199 237 IPR001841 -
Acco03g0973 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 155 244 IPR013083 -
Acco03g0973 247 ProSiteProfiles Zinc finger RING-type profile. 199 238 IPR001841 -
Acco03g0973 247 SUPERFAMILY RING/U-box 188 243 - -
Acco03g0973 247 Pfam Ring finger domain 198 238 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0973 Acco-ChrAcco03 20531558 20532301 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0973 115 239 C3H Transcription Factor Family AT1G68180 30.469 7.38e-11 58.5