Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0971 ATGGTTCTTACACAAACAGCTATACTTTTTCTTCTTCTATTCCCACTCTTGTTCATTGTCTCTTTCTTTACTCTGTTCTCACATGCAGCGAGTTCCATCACCCCACGCATATTGATCAGAGACGTGCCAGACGGTGAAACTTTACTCTCAGAAGAACTCAATTTCGAACTTGGATTTTTCAGTTTAGATAATAACAGCTCTTTGAGATACGTTGGAATTTGGTACTATAAAATTCCCGGAGCAGCATTCATATGGGTTGCGAACAGAGACAGACCCATCAAAGGCAGAGTAGGGGTTATAACTATTGGTATAGATGGGAATTTGGTCATCTTCGATGGGGATAAGAATCAAGTATGGTCGAGCAACGTATTGAACACCAAGGATAATAACACAGAAGCTGTTCTTCGAGATGATGGAAACCTTGTTCTTTCCACTAAGGATGATGATGATGAAAGAGAATTATGGAAAAGCTTTGATCATCCAACCGACACGTTTCTTCCAGGTATGACCATACCAGTGAATCCTTCAAAAGGCGAGATTCGACCTTTTGTGTCATGGAAATCTAGCACTGATCCTGCTCGAGGAAGTTTCACAATGGGAATCGATCCACGAGCATCAACCCAGATAGTGATTTGGGAAGGAGATAAAAGGAGGTGGAGAAGTGGGTATTGGGATGGAAGAATATTCACAGGAGTTTCAAACATGACAGGAAGTTATCTTTATGGATTCAGACTCAACACTGATGGAAATGGAGAAAGGCATTTAGCTTATACCCCATTGGAGAACACTGAGAAAGTGAGGTTTCAGATAGGTTGGGATGGGTTTGAGAGGCAATATAAATGGAATGATGGTGAGAAACGGTGGCATAGAACACAGGAAGAGCCATATAACAATTGTGAGATTTATAACAAGTGTGGGAGTTTTGCAGAATGTAGTTTGGCTTCTCCAATGAAATGTGTTTGCATAAGAGGGTTCGAGCCGAAGGAAGTGGATGAGTGGACGAAAGGGAATTGGTCCAGTGGGTGTAAGAGGATGACACCATTGAAGGCTGAGAGAAATAGTAACAGTAATAATGGTAGTTTTGTTGCTGCAAAAGAAGTGGATGTTGAAGAAGATGGTTTTGTGAAGCTGCAATGCAAGAAGTTGCCTGATTTCGCGAGGTTGGTGGGTCCTCAAGACAAGAATGATTGTGAGAGTTATTGCTTGCAGGATACCAATTGTACCGCATATACTTCTGTTAATGGAATTGGATGCTTGATTTGGCGTGGTGAGTTACTTGATATTAAGGACTTTGAAGATGGAGGAGGAAATACACTCTATATACGCCTTGCTCATTCTGATTTAGGTGATGGGAAGAAGAAGATCAAGATTGTGATAATATTTTCTGTTGTGTTGGGGTCAATCTGCCTCGGAATTTTTCTTTGGCTGGTGTGGAGGTTCAGGGGAAGAAAAGTTGCTGCAGCTTCATGCTGTAAAACAAGTGATATTCCAGTTTTTGATATTACGAGAAGCAAGAGTAGACAAGTTTCAACAGAATTTTCAGGATCAGCCGAACTGAGTTTAGAAGGTCATGAGCTAAGTGAACCAGAACTGCCATTATTCAATTTTGATTGTATTGCAATAGCCACAAACAATTTCTCAGACGAAAATAAGCTTGGCCAGGGAGGATTTGGTCCAGTCTACAAGGGAAAGCTTCGTGGGGGCGAGGAAATTGCTGTCAAGAGGCTTTCAAGAAGATCTGGGCAAGGTCAAGAGGAGTTTAAGAATGAGATGATGTTGATTGCCAAACTACAACATAGAAACCTTGTTAGACTATTAGGATGTTCCATCCAAGGAGAAGAGAAGTTGTTGGTATATGAATACATGCCAAACAAAAGCTTGGATCAATTTTTATTTGATCCTCTAAGACAGCAGCAACTAAATTGGAATAAGCGATTTGAAATCATTGAAGGGATTGCTAGAGGGTTGCTTTACTTGCATCGAGATTCAAGACTTCGAATAATTCATCGTGACTTAAAAGCAAGTAACATTCTTTTGGATGAAGACATGAACCCGAAAATTTCAGACTTTGGGCTTGCAAGGATATTTGGAGGAGGCCAAGGCGAGGTGAATACTACTAGAGTAGTTGGCACATATGGTTATATGGCTCCTGAATATGCAATGGAAGGTCTATTCTCAGTTAAATCTGATGTCTATAGTTTTGGTGTATTATTACTTGAGATTGTAAGCGGGCGCAAAAACACTAGCTTTCGCCATTCTGATGACTCCAGTCTCATAGGATATGCATGGCATCTTTGGAATGAAGGAAGAGCAATGGAGATTGTTGACCCTTCGATTTGTGATTCGAGTCTGAAGAACCAGCAGGTTTTGAGATGCATACACATAGGGATGTTGTGTGTGCAGGATTCAGCAGCTCATAGACCAACCATGTCTTCTGTGGTACTGATGCTAGAAAGTGAAGCGACTAATCTTCCTTTGCCAAAACGGCCTTTACTTACTTCTATGAGAAGAAGATCAGAAGACAGAGATTTTTATATGGAAGGTCTTGATGTTTCCTTGAATGAGCTTACAGTTACAATGGTGTTAGGAAGATAG 2595 0.4081 MVLTQTAILFLLLFPLLFIVSFFTLFSHAASSITPRILIRDVPDGETLLSEELNFELGFFSLDNNSSLRYVGIWYYKIPGAAFIWVANRDRPIKGRVGVITIGIDGNLVIFDGDKNQVWSSNVLNTKDNNTEAVLRDDGNLVLSTKDDDDERELWKSFDHPTDTFLPGMTIPVNPSKGEIRPFVSWKSSTDPARGSFTMGIDPRASTQIVIWEGDKRRWRSGYWDGRIFTGVSNMTGSYLYGFRLNTDGNGERHLAYTPLENTEKVRFQIGWDGFERQYKWNDGEKRWHRTQEEPYNNCEIYNKCGSFAECSLASPMKCVCIRGFEPKEVDEWTKGNWSSGCKRMTPLKAERNSNSNNGSFVAAKEVDVEEDGFVKLQCKKLPDFARLVGPQDKNDCESYCLQDTNCTAYTSVNGIGCLIWRGELLDIKDFEDGGGNTLYIRLAHSDLGDGKKKIKIVIIFSVVLGSICLGIFLWLVWRFRGRKVAAASCCKTSDIPVFDITRSKSRQVSTEFSGSAELSLEGHELSEPELPLFNFDCIAIATNNFSDENKLGQGGFGPVYKGKLRGGEEIAVKRLSRRSGQGQEEFKNEMMLIAKLQHRNLVRLLGCSIQGEEKLLVYEYMPNKSLDQFLFDPLRQQQLNWNKRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEDMNPKISDFGLARIFGGGQGEVNTTRVVGTYGYMAPEYAMEGLFSVKSDVYSFGVLLLEIVSGRKNTSFRHSDDSSLIGYAWHLWNEGRAMEIVDPSICDSSLKNQQVLRCIHIGMLCVQDSAAHRPTMSSVVLMLESEATNLPLPKRPLLTSMRRRSEDRDFYMEGLDVSLNELTVTMVLGR 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0971 864 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 622 825 - -
Acco03g0971 864 Gene3D Transferase(Phosphotransferase) domain 1 622 825 - -
Acco03g0971 864 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 192 IPR036426 -
Acco03g0971 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 667 679 IPR008271 GO:0004672|GO:0006468
Acco03g0971 864 CDD B_lectin 44 161 IPR001480 -
Acco03g0971 864 Gene3D - 42 227 - -
Acco03g0971 864 Gene3D Phosphorylase Kinase; domain 1 508 621 - -
Acco03g0971 864 CDD PAN_AP_plant 368 444 - -
Acco03g0971 864 Pfam D-mannose binding lectin 83 187 IPR001480 -
Acco03g0971 864 ProSiteProfiles PAN/Apple domain profile. 369 444 IPR003609 -
Acco03g0971 864 CDD STKc_IRAK 552 818 - -
Acco03g0971 864 ProSiteProfiles Protein kinase domain profile. 546 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0971 864 PIRSF SRK 3 864 IPR024171 GO:0004674
Acco03g0971 864 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 511 621 - -
Acco03g0971 864 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 158 - -
Acco03g0971 864 Pfam Protein tyrosine and serine/threonine kinase 549 815 IPR001245 GO:0004672|GO:0006468
Acco03g0971 864 SMART ntp_6 369 443 IPR003609 -
Acco03g0971 864 Pfam S-locus glycoprotein domain 219 328 IPR000858 GO:0048544
Acco03g0971 864 SUPERFAMILY Protein kinase-like (PK-like) 526 818 IPR011009 -
Acco03g0971 864 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 808 - -
Acco03g0971 864 SMART serkin_6 546 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0971 864 ProSiteProfiles Bulb-type lectin domain profile. 33 156 IPR001480 -
Acco03g0971 864 Pfam PAN-like domain 370 428 IPR003609 -
Acco03g0971 864 SMART blect_4 39 161 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0971 Acco-ChrAcco03 20368614 20372208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0971 520 830 Receptor kinase-like Gene Family AT4G23230 61.538 3.55e-132 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g0971 PK_Tyr_Ser-Thr 2.7e-48 CL0016