Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0951 ATGGGAGGTTTTCTTGGCTACCTCCATATCAATCTCTTCTGGAGATTTGCTTTTGTACTCTCTTTATTTTCTGCAGTTTCCTTCTCTAGTGATACCTTAAATTCAACCCAATCACTAGGGATTAACCAAACCCTTGTATCTTCTAATCAAGTGTTTGAATTAGGGTTCTTCAATTCAAATTCTTCCAGATGGTACTTGGGAATCTGGTACAAGAACATTCCTGAGAGAACAATCGTCTGGGTAGCAAACAGAGACACCCCACTTGGAAATTCCACTGCAACTCTGAAACTCGGAGACAGATCAAACCTGGTTCTTCTTGATCCAGCAAGAAATTCCGTATGGTCCTCAAATCAATCACAATCTGCACTTTCAAATCCTGTGCTCAAGCTTTTGGATTCTGGGAATCTGGTAATTAAAGAAGCAAATGAAACTGATGACAATGGAAACTTTCTCTGGGAAAGCTTTGATTTTCCCACAGACACTTTGTTACCTGGTATGAAGTTAGGGTGGGACTTTGGCAAAGGCATTGAATGGCGTTTAACATCATGGAAGAGCAAAGATGACCCTTCAAGTGGAGATTACTCTTTGAAACTAGAACATCAAGGAATCCCAGAAGCTTTTTTGTATAATAAAGAGGTAAAAACATTTAGAACTGGACCCTGGAATGGTATAAGATTTGGTGGATTACCAGTACTCACTTCACAAGCTGTTGTTCAAGATACTTTGGTTCAAGATTCAGACGAGGTGTACTTCACGCCCTCTTCTGTTTTAAACGGTAATCAGTCCATGCTTACAAGGCTTGTTATAAATTGGACAGGAGATGTTCAAAGATTTATAAGAACACAAGGAAGCCAAAATTGGAACATGATATGGTCTGCACCTCAAAGCCAATGTGATAACTACTTTCAGTGTGGTCCATATGGTATATGTGATGCCAATGCTTTTCCTGTATGTAAATGCTTTCAAGGGTTCAACCCAAGAAATCAGAATGAATGGGATTTGAGAGTTTTCACCAATGGCTGCATGAGGGCCACAGGTTTGAATTGTCCAACAGACAAGTTCTTGCAGCTGCAGCATGTGGAGTTACCTGATACAACGAATGTGTTTGTTAACAATAGCATGTCCCTTTCAGAATGTGAGGATATGTGCGGGAAAAATTGTTCTTGTAGTGCTTATGCTAATGTGAAGGTCACCAATGGAGGAACAGGTTGTGTTATATGGACCGGGGAGCCAAAAGACATGAGGCAGTTTTCTGAAGGTGGCCAAGATGTCTTTGTTAGAGTTGCTGCTTCTGTTGTTACTAATTCAGGATCAGCAAGTGGCTATGGCAAGAAGAAAAACACAGGCATGATCGTAGGCATTACAGTAGGAGCAATTATCGTAGTTTTGGGGTTGACTATGTTTCTTTTGTGGAAGAGAAAGTCACAAAATATACCAAAAATAATAGCAAAGCAGATAGGTGCTTCTTGGACAAGTCAACATATAATTTTAAACTCAAGAAATACAGAACATTCTGGTGATACGAACATGGATGATCTAGAGTTGCCATTGTTTGATTTTCATACCTTAACAATGGCTACAGACAATTTCTCAGAGGCAAATAAACTTGGAGATGGAGGCTTTGGCAGCGTTTACAGGGGTAGATTGCTTGAAGGGCATGATATTGCTGTAAAGAGGTTATCAAAAATCTCAGGGCAAGGGATCGAAGAATTCAAGAATGAAGTAAAGTTGATTGTGAAGCTTCAACATCGAAATCTTGTACGAATGCTTGGTTGCTGCATTGAGAAGGAGGAAAAGTTATTGGTTTATGAGTACATGGAAAATAAAAGCCTTGATTTTTTCCTATTTGAAAAAGAAAAAAGTTCCTCATTGGACTGGCAATTACGCTTCAACATTATATGCGGAATAGCAAGAGGACTTCTTTATCTTCACCAAGACTCCAGACTTAGAATTATTCATAGGGATCTCAAGGCAAGCAACATTCTACTTGACAAAGAAATGATTCCAAAGATATCAGATTTTGGGATGGCTAGAATCTTTGGCAATGATCAAACAGAAGCAAAAACAATAAGAGTTGTAGGGACATATGGCTATATGTCTCCAGAATATGCATTGGGGGGACTCTTTTCTATGAAATCTGATGTTTATAGTTTTGGAGTTCTTGTGCTAGAGATAGTAAGTGGCAAGAAGAACAAAGGATTTTATTACTCAGATGAGTTAAACCTCCTTGGACATTCATGGAAGCTGTGGAATGAAGGATGTGCATTGGAATTGGTGGATCCATCATTTGGTAAATCATATTCATCATCTGAAGCATTAAGATGCATAAAGGTTGGTTTAATCTGTGTTCAAGAAAAACCAGAAGATAGACCAACAATGTCTTCTGTGGTGTTAATGTTGAGTAGTGAAAATGCTTCAATACCAGATCCTAAGAACCCAGGTTTTGTTGCAAGGACTCATGTTGATACTGATTCTTTAATCCAACAAGAAGAATCATACTCTGTGAATCAAGTTACAGTCACAGTAGTAGATGCTAGATAG 2541 0.3876 MGGFLGYLHINLFWRFAFVLSLFSAVSFSSDTLNSTQSLGINQTLVSSNQVFELGFFNSNSSRWYLGIWYKNIPERTIVWVANRDTPLGNSTATLKLGDRSNLVLLDPARNSVWSSNQSQSALSNPVLKLLDSGNLVIKEANETDDNGNFLWESFDFPTDTLLPGMKLGWDFGKGIEWRLTSWKSKDDPSSGDYSLKLEHQGIPEAFLYNKEVKTFRTGPWNGIRFGGLPVLTSQAVVQDTLVQDSDEVYFTPSSVLNGNQSMLTRLVINWTGDVQRFIRTQGSQNWNMIWSAPQSQCDNYFQCGPYGICDANAFPVCKCFQGFNPRNQNEWDLRVFTNGCMRATGLNCPTDKFLQLQHVELPDTTNVFVNNSMSLSECEDMCGKNCSCSAYANVKVTNGGTGCVIWTGEPKDMRQFSEGGQDVFVRVAASVVTNSGSASGYGKKKNTGMIVGITVGAIIVVLGLTMFLLWKRKSQNIPKIIAKQIGASWTSQHIILNSRNTEHSGDTNMDDLELPLFDFHTLTMATDNFSEANKLGDGGFGSVYRGRLLEGHDIAVKRLSKISGQGIEEFKNEVKLIVKLQHRNLVRMLGCCIEKEEKLLVYEYMENKSLDFFLFEKEKSSSLDWQLRFNIICGIARGLLYLHQDSRLRIIHRDLKASNILLDKEMIPKISDFGMARIFGNDQTEAKTIRVVGTYGYMSPEYALGGLFSMKSDVYSFGVLVLEIVSGKKNKGFYYSDELNLLGHSWKLWNEGCALELVDPSFGKSYSSSEALRCIKVGLICVQEKPEDRPTMSSVVLMLSSENASIPDPKNPGFVARTHVDTDSLIQQEESYSVNQVTVTVVDAR 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0951 846 SMART ntp_6 349 428 IPR003609 -
Acco03g0951 846 CDD STKc_IRAK 536 800 - -
Acco03g0951 846 ProSiteProfiles PAN/Apple domain profile. 349 429 IPR003609 -
Acco03g0951 846 Pfam Domain of unknown function (DUF3403) 802 846 IPR021820 GO:0004674
Acco03g0951 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Acco03g0951 846 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 189 IPR036426 -
Acco03g0951 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 155 - -
Acco03g0951 846 ProSiteProfiles Protein kinase domain profile. 530 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0951 846 Pfam D-mannose binding lectin 77 184 IPR001480 -
Acco03g0951 846 ProSitePatterns Protein kinases ATP-binding region signature. 536 558 IPR017441 GO:0005524
Acco03g0951 846 Pfam S-locus glycoprotein domain 216 327 IPR000858 GO:0048544
Acco03g0951 846 Pfam Protein tyrosine and serine/threonine kinase 533 798 IPR001245 GO:0004672|GO:0006468
Acco03g0951 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 606 808 - -
Acco03g0951 846 Gene3D Phosphorylase Kinase; domain 1 504 605 - -
Acco03g0951 846 Gene3D - 24 155 IPR036426 -
Acco03g0951 846 ProSiteProfiles Bulb-type lectin domain profile. 30 151 IPR001480 -
Acco03g0951 846 CDD B_lectin 36 158 IPR001480 -
Acco03g0951 846 PIRSF SRK 5 846 IPR024171 GO:0004674
Acco03g0951 846 SMART serkin_6 530 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0951 846 SMART blect_4 36 158 IPR001480 -
Acco03g0951 846 SUPERFAMILY Protein kinase-like (PK-like) 511 800 IPR011009 -
Acco03g0951 846 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 791 - -
Acco03g0951 846 Pfam PAN-like domain 350 413 IPR003609 -
Acco03g0951 846 CDD PAN_AP_plant 347 429 - -
Acco03g0951 846 Gene3D Transferase(Phosphotransferase) domain 1 606 811 - -
Acco03g0951 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 495 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0951 Acco-ChrAcco03 19668413 19671610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0951 444 820 Receptor kinase-like Gene Family AT4G23190 52.742 5.28e-139 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g0951 PK_Tyr_Ser-Thr 1.2e-47 CL0016