Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0946 ATGCAAGCAGGTGTGACATGTGTCCGCTTTGAGATCACTTGTTCAACATCACAATACTTGGGATGTGGAACAACTTTTGAAAGAATGAAATTCAAAGGTTATGTTGAGAAAGTTGAAGATTATAAACCATTCACGAAAGATCCCAATTTCAATGTCTTCCGGCAGCTGGGATCTCATGCTTCAAAAGTCAATACAATTGACTTGAACTTTTCAAGTTCCAGCAAGAAAAATCTCGATGCCTTGCAGCCTTTGATATTTAATATGAAGAAAACTGTTGTTTGGGTGGCTAATAGAGAGAATCCCATGAATGACATCTCTGGAGTTCTTTCTATCAGCTCAGATGGAAATTTAGTTCTTCATGATTCAGGAAGCTTCTCTGTTAGGTTCAATACTAGTGGAAAATCTCAGTTGTTTCTGGACAAAAACAATGCACCGTGGTGGCGAATCGGATCCTTCAACGGCGAAATGTATGTTGGCAATCCTTTTATGAAACAAGCAATGACAACTGATTTCAACATGACTATCTTGGATGATGATAATGTGGTTGCGTTTGGATATAACGCCTATGACAAGTCAATAGTTGTGCGAGCTGTTGCTGTTCAATCTGGATCATTTCAGGTGATGGTATGGGATTCGAATAAGAAACAATGGAATCGATACTGGTATGGTCCAAAAGTGGATTGTGACATGTATGGTTCTTGTGGGGCTAATGGCAACTCTGCTGATGTGAGAAATGGTGGAAGTGGGTGCTTAGCTTGGCATGGGACTTTGACGGACACAATGGTATTAAGTGAGGAAGGCCATGATTTATATGTTCGGGTTGATGCTATTGAACTTGCAAAAAATGCTACAAAACCAAAAGGAGGACTTGGTAACTTTGGGAAAGTGGGAATTGCCATGGCTTGTGTCGCTTTGGTTATTCTTCTTACTCTCTATGAAATATTGTATATTTCATTTCATGTCTTACTTCTTTGTGATGAAATTCCCGAAGTGGAATTTAATTTAGATTCCCCAACAAATGAAGAACAACATGGAGAAAATGGGGCACAACCAAGCTTACCATTTTTCAGAGTCAAAATCATAATGACTGCAACAAACAACTTCTCAAATGAGAATCAATTAGGGCAAGGTGGATTTGGTCCTGTATACAAGGGCTTATTAGATAATGGACAAGATATAGCAGTGAAAAGATTGTCCAAAGATTCTGGACAAGGGATTCAAGAGTTCAAGAATGAAATTAAAGTAATTGCGAAGCTGCAACATAGGAATCTTGTTAAGTTGCTTGGGTATTGCATTCATAAGGAGGAAAGGATGTTGATATATGAATACCTACCCAACAAAAGCTTGGATTTCTTTCTCTTTGATACGAATCATAGAACGCCATTAGATTGGGATACACGTTTTCATATTATATGTGGAATTGCTCGAGGTCTTCTCTATCTTCATCAAGATTCAAGGCTGAAAATAATCCATAGAGATCTTAAAGCTAGCAATATTCTCTTGGATGCTACAATGAATCCCAAAATTTCAGATTTTGGCATGGCTAGAATATTTGGTGAGGATCAAATCCAAGCAAGAACAAGTCGAATCGTTGGGACATATGGTTATATGTCTCCAGAATATGCAATGGTAGGACAATATTCAACAAAGTCTGATGTTTTTAGCTTTGGTATCCTTTTGTTAGAGATCATTAGTGGCAAGAGAAATACAAATTGGCACAATGGAAGACCATCCCTAAATTTGATTGGACAGGCATGGGACTTGTGGAGAGATGGAAAGGCCTTGGACATAATGGACTCAACACTTGGTGAATCATATCCTCTTGATGCAGCCCTAAAGTGTATACAAATTGGGCTCTTATGTGTACAAGAAAGTGCCTTCTATAGGCCATCCATGTTAGAAGTTGTTTTCATGCTTGGCAATGAAGTAAGCATACCATCACCTCGCAAGCCTGCTTTCCTATTCAATTCTGAAATAGAGCATTTACAGTTTTCAACATCTGGAGATCCTTCAGTAAACGAGATGAGTACTTCAATCAGTGCTCGGTAA 2049 0.3856 MQAGVTCVRFEITCSTSQYLGCGTTFERMKFKGYVEKVEDYKPFTKDPNFNVFRQLGSHASKVNTIDLNFSSSSKKNLDALQPLIFNMKKTVVWVANRENPMNDISGVLSISSDGNLVLHDSGSFSVRFNTSGKSQLFLDKNNAPWWRIGSFNGEMYVGNPFMKQAMTTDFNMTILDDDNVVAFGYNAYDKSIVVRAVAVQSGSFQVMVWDSNKKQWNRYWYGPKVDCDMYGSCGANGNSADVRNGGSGCLAWHGTLTDTMVLSEEGHDLYVRVDAIELAKNATKPKGGLGNFGKVGIAMACVALVILLTLYEILYISFHVLLLCDEIPEVEFNLDSPTNEEQHGENGAQPSLPFFRVKIIMTATNNFSNENQLGQGGFGPVYKGLLDNGQDIAVKRLSKDSGQGIQEFKNEIKVIAKLQHRNLVKLLGYCIHKEERMLIYEYLPNKSLDFFLFDTNHRTPLDWDTRFHIICGIARGLLYLHQDSRLKIIHRDLKASNILLDATMNPKISDFGMARIFGEDQIQARTSRIVGTYGYMSPEYAMVGQYSTKSDVFSFGILLLEIISGKRNTNWHNGRPSLNLIGQAWDLWRDGKALDIMDSTLGESYPLDAALKCIQIGLLCVQESAFYRPSMLEVVFMLGNEVSIPSPRKPAFLFNSEIEHLQFSTSGDPSVNEMSTSISAR 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0946 682 SUPERFAMILY Protein kinase-like (PK-like) 351 657 IPR011009 -
Acco03g0946 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Acco03g0946 682 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 294 676 - -
Acco03g0946 682 Pfam S-locus glycoprotein domain 147 247 IPR000858 GO:0048544
Acco03g0946 682 Pfam Protein tyrosine and serine/threonine kinase 370 569 IPR001245 GO:0004672|GO:0006468
Acco03g0946 682 CDD STKc_IRAK 374 639 - -
Acco03g0946 682 ProSiteProfiles Protein kinase domain profile. 368 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0946 682 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 148 IPR036426 -
Acco03g0946 682 SMART serkin_6 368 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0946 682 ProSiteProfiles Bulb-type lectin domain profile. 41 196 IPR001480 -
Acco03g0946 682 Pfam D-mannose binding lectin 91 131 IPR001480 -
Acco03g0946 682 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 444 646 - -
Acco03g0946 682 Gene3D Transferase(Phosphotransferase) domain 1 444 645 - -
Acco03g0946 682 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 334 443 - -
Acco03g0946 682 Gene3D Phosphorylase Kinase; domain 1 334 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0946 Acco-ChrAcco03 19577954 19583868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0946 356 678 Receptor kinase-like Gene Family AT4G11530 55.723 1.16e-123 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g0946 PK_Tyr_Ser-Thr 1.5e-47 CL0016