Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0945 ATGGACGAGAAGCAGCAGGTTATAATGTCAGCATTTGGTGTTGGGGTTGGTGTGGGAGCAGGGCTTGGATTGAGTTCAACGCTTGGAGGGAATAATGTCAACTCTAATGAAGAGCTATGGAATGAACAAGTTAAACAAGAGCTCTTGAGACAGGTGATTGATGGCAAGGAATGCAAGGAAAATTTTCAAGACTTTCCTTATTACTTAAGTGAAAGAACTAGGGAATTATTGATGAGTGCTGCATTTGCAATTTTACTCTCTGGACCTACTGAACTTTACCTGCAAACAATTGCCAAGGCTTTAGCACATCACTTCGAATCAAAGCTGCTGCTGCTAGATATTGTTGACTTCTCTTTCAAGATAAGGAGAAAATATGGATGTGCAGGAAAAGAATCAATCAACAAAAAAGCATTCAATCTTCCAAAAGGTCCTTATCCGAGGTGGCTACCGAGTACCGACATGTGCATCGATAAACAACTCTTCATGCAGTTGCTTCATAAGGTCTTGGTTTCTGTCTCAGAAAAAAGTTCCGTCATATTATACATCAGGGATGTTGAGAAGACTTTCCTGAAATCAGAACAATTATATAACTTGTTTCACGAAATATTGGAAGAACTTTCAGGGCCAATTTTAATACTTGGTTCCCAAATAACTGAGGTCGAAAATGAATTGCTACCAAATGGGTGGTTACCGTGTTATATTCAAGAGGTTGATGAAGAATCTGATGAAAGGATCACCGCATTATTCCCTTACAAGATTGACATCATAGCTCCTAAAGATGAAAATAATCTTCGAAACTGGAAAAAACTACTGAAGGAGAACAAGAAAATAACTCAGTCTCAAGATAACCAAAACCACTTTGCTAAAGTACTTGCAGCAATTAATGTTGAATGTGCAGACTTGAATTCAATCAGCCACGAGGATACAAAGATACTAAGCAAATATGTTGAAGAAATTGTGGCATCTTCAGTATCTTACTACTTGATGAATACCAAGGATCCGAAATATCATAATGGAAAGCTTGTAATATCATCTGAAAGTTTGTGCCATGGTTTGGATCTATTCCGCGAAAGCAATAGTGTCAAGGATGCTCAGAAGCAAGAGACTGTTGGAAACAAAGAAGTTAGTCCAGACAATAAGTACGAAGAGAACATGAGATCAGAGCTTATCCCTGCAAAGGAGATAGGAGTAACAGTTGCAGATATAGGTGCATTAGAGGAAATTAAGGAGTCACTCCAAGAGCTAATCATGCTTCCCCTTCGAAGACCAGAACTCTTCAAAAGCGGACTTCTTAAGCCTTGTCGAGGTATATTGCTTTTTGGCCCTCCAGGCACTGGAAAAACAATGCTTGCAAAAGCAATTGCACGTGAAGCAGGAGCAAGTTTCATCAATGTTCCAATGTCTGCCATCACATCAATGTGGTTTGGAGAAGCTGAGAAGAATGTTCGAGCTCTGTTCACACTAGCAGCAAAAGTTTCTCCAACCGTTATTTTTATTGATGAGGTTGATAGCTTGCTCGGCCAACGGTCGAGATGTGGAGAGAATGAGGCTACAAGGAGGATTAAGAATGAGTTCATGACCCATTGGGATGGTTTATTGACAAAACAAGATGAGAGAATTCTAGTTCTTGCTGCAACCAACAGGCCATTTGACCTTGACGATGCAATCATAAGACGGTTTCAGCGAAGAATCATGGTTGGTCTTCCATCAGTTGAGACTAGGGAGATTATCTTTAAAACTATACTAGCTAAGGAAAATACTGAAAACTTAGACTTCAAAGAGCTTGCAGTCATAACAGAGGGATATACTGGGAGCGACCTCAAGAATTTGTGCACTGCTGCTGCTTATCGACCTCTTAGGGAGCTAATAAAGCAGGAGACATTGAAGGATTTGGAAAAGAATAAGAAAGAGGCTGAAGGCCAAAGCTCGGAAGCTGCTTCAAGCGCCAAAGAGGATGAAAAAGAGAGGGAAAAGAAGAAGAATGAAGCTGAAGGTCAAAGCCCAGAAGCTGCTTCAAGTGATAAGGAGGACAAGGAAGATCCAGTAATTACCTTGAGGCCTATAAACATGGAAGACATGATTCAGGCTAAGAAACAGGTTCCTGCAAGTTTTGATGCTGATGGATTAATAATGCATGAACTGAAGGAGTGGAATGAGCTGTATGGAGAACGAGGTTTACGGTAG 2184 0.4043 MDEKQQVIMSAFGVGVGVGAGLGLSSTLGGNNVNSNEELWNEQVKQELLRQVIDGKECKENFQDFPYYLSERTRELLMSAAFAILLSGPTELYLQTIAKALAHHFESKLLLLDIVDFSFKIRRKYGCAGKESINKKAFNLPKGPYPRWLPSTDMCIDKQLFMQLLHKVLVSVSEKSSVILYIRDVEKTFLKSEQLYNLFHEILEELSGPILILGSQITEVENELLPNGWLPCYIQEVDEESDERITALFPYKIDIIAPKDENNLRNWKKLLKENKKITQSQDNQNHFAKVLAAINVECADLNSISHEDTKILSKYVEEIVASSVSYYLMNTKDPKYHNGKLVISSESLCHGLDLFRESNSVKDAQKQETVGNKEVSPDNKYEENMRSELIPAKEIGVTVADIGALEEIKESLQELIMLPLRRPELFKSGLLKPCRGILLFGPPGTGKTMLAKAIAREAGASFINVPMSAITSMWFGEAEKNVRALFTLAAKVSPTVIFIDEVDSLLGQRSRCGENEATRRIKNEFMTHWDGLLTKQDERILVLAATNRPFDLDDAIIRRFQRRIMVGLPSVETREIIFKTILAKENTENLDFKELAVITEGYTGSDLKNLCTAAAYRPLRELIKQETLKDLEKNKKEAEGQSSEAASSAKEDEKEREKKKNEAEGQSPEAASSDKEDKEDPVITLRPINMEDMIQAKKQVPASFDADGLIMHELKEWNELYGERGLR 727
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0945 727 Coils Coil 621 666 - -
Acco03g0945 727 SMART AAA_5 433 570 IPR003593 GO:0016887
Acco03g0945 727 Gene3D - 570 703 - -
Acco03g0945 727 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 396 571 - -
Acco03g0945 727 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 397 637 IPR027417 -
Acco03g0945 727 MobiDBLite consensus disorder prediction 633 690 - -
Acco03g0945 727 Pfam ATPase family associated with various cellular activities (AAA) 437 567 IPR003959 GO:0005524|GO:0016887
Acco03g0945 727 MobiDBLite consensus disorder prediction 633 685 - -
Acco03g0945 727 Pfam AAA+ lid domain 589 633 IPR041569 -
Acco03g0945 727 ProSitePatterns AAA-protein family signature. 540 559 IPR003960 GO:0005524|GO:0016887
Acco03g0945 727 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 42 725 - -
Acco03g0945 727 Gene3D - 397 706 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco03g0945 Acco-ChrAcco03 19541130 19545739 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0945 401 628 Calmodulin-binding Proteins AT3G56690 39.744 9.95e-41 159