Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0942 ATGGAGCACAATCAGGTTTTTCTGTCAGCATTGAGTCTTGGGGTTGGGATTGGAGCAGGCCTTGGGTTGAGCTCAGGGCTTGGAGGGAATCGTGAGTCTGGTGATAAGCTTCATGATGAACGAATTGAGCAGGAGCTTTTGGGGCTGGTGATTAATGGAAAGGAATGCGAGGAAACTTTTCAAGAGTTTCCTTATTACTTAAGTGAAAAAACCCGTGAGTTATTGAAAAGCTCTGCATCTGTTCATTTAAGACAACATTTCTTTTCCAAACACACTCGGAACCTTTCACCAGCAAGCAGAGCAATTTTGCTTTCTGGACCCGCAGAGTTTTACCTACAAAGCCTCGTCAAGGCTTTAGCGCATCACTTTGAATCAAAGTTGCTGCTGCTGGATGTAGTTGAATTCTCTTTCAAGATACAGAGAAAATACGGATATGTAATAAAGGAACCATCTTCTATAATGTCCTTATCTGAGGTGGCTTCTGAGAGAGTGTCTGGTTTGTCTGGATCGTTTTCAGTCCTCTCTTCAAATGGCAAAACTAAAGCTCCCTTGAAGCAGAAAAGCAGCTTGTGTGTTGATGAAAAACTCTTTATGCAGTCGCTTTATAAGGTCTTGGTTTCTGTGTCAGGAAAGAGTTCCATCATTTTGTACATCAGGGATGTTGACAAGATTTTCCTCCAATCGGAGCAACTGTATGATTTGTTTCATCAAATGCTAGGGCAACTTCCAGGGCCAGTGCTGATACTTGGTTCCAAGATTGCAGACGAAATCAAAAAGCCTGGAGGTCTCCCACCATGGATTGGTTCCTCACGCAAAGAGGAAAAAAGTTCGGAAGTTGATGGAAGGCTCGCAGCATTATTCCCTTACAGCATTAAGATCAAACCACCAGAAGATGAAACTGATCTTGAAGATTGGAAAGCCCAACTGAAAGAGAACAAGAAAACAGTTGAGTGTCAAGATAACAGAAACTACATTTCTGAAGTATTGGCAGCAAATGATGTTGAATGTAAAGACTTGAATTCAATCAGCCATGAGGACACAAAGATACTACGTAATCATGTTGAAGAAATTGTGGTACCTGCAATATCTTATTACTTGACGAATACCAAGGATCCACAATATCAGAACAGAAAGCTTGTAATATCATCTGAGAGTTTGTGCCATGGTTTGGATCTATTTCGTAAAAAGAAAGGTGGTGATGATCGAAAGAAGAAAGAGACTAATGGAAAGAAGCTATCTTTAGAGAAGAAAGAGATTAATGGAAAGAAGGAAGTTAGTCCAGACAATCCCCATGAGAGGCACATAAGATCAGAACTTATACCACCAAATGAGATAGGAGTGACATTCTCAGATATTGGTGCATTAGATGAAGTTAAGGAATCACTCCAAGAGTTAGTCATGCTTCCCCTTCGAAGACCGGAGCTCTTCGAAACTGGACTTCTTAAGCCTTGTCGAGGTATATTGCTTTTTGGACCTCCAGGTACTGGAAAGACAATGCTTGCAAAGGCAATTGCAAATGAAGCAGGAGCTAGTTTCATCAATGTCTCCATGTCTACCATGACATCAAACTTGTTTGGGGAAGGTGAGAAGCATGTCCGAGCCCTGTTCACATTGGCTGCAAAGGTTTCTCCAACTATTATTTTTATTGATGAGGTTGATAGCTTGCTCGGGCGACGAGCAAAACATGGGGAGCATGAGGCTACAAGGAGGATTAAGAATGAATTCATGACTCATTGGGATGGTCTGTTGACCAAACATCGTGAGCAGATTCTTGTTCTTGCTGCAACCAATAGGCCATTTGACCTTGATGATGCAATCATAAGACGGTTTGAGCGGAGATTCTTGGTTGGTCTTCCATCTCTGGAGACTAGGGAGATTATTTTGAAAACTATACTTGCTAAGGAAAATACTGAAAACTTCGACGTCAAAGAGCTTGCAGTCATGACAGAGGGATATACTGGGAGCGACCTCAAGAATTTGTGCACTGCCGCTGCTTATCAACCTGTCAGGGACCTAATAAAGCAGGAGAAATTGAAGGATATGGAAAACAATAAAAAAGAGGTTGAAAGCCAAAGCTCAGAGGCTGCTTCAAGTCCCAAAAAGGATTCAGAAGAGCAAGACATGAATAAGAAAGATGCCAAAGGCCAAAGCTCACAAGCTGCTTCAAGTCCCAAAGAGGATCCAAAAGAGAAAGGCAAGAATAAGAAAGATTCCAAAGGCCAAAGCTCAGAAGTTGATTCAAGTGCTAAGGAGGACAAAGAAGAGCCAGTAATTAACTTGAGGCCTATAAATATGGAAGACATGATTCAGGCCAAGAAACAGGTTCCTGCAAGTTTTGATGCTCACGGACCAATTATGTATGAGTTGAAGCGATGGAATGAGCTGTATGGAGAACGAATTTCGCTGTAG 2409 0.418 MEHNQVFLSALSLGVGIGAGLGLSSGLGGNRESGDKLHDERIEQELLGLVINGKECEETFQEFPYYLSEKTRELLKSSASVHLRQHFFSKHTRNLSPASRAILLSGPAEFYLQSLVKALAHHFESKLLLLDVVEFSFKIQRKYGYVIKEPSSIMSLSEVASERVSGLSGSFSVLSSNGKTKAPLKQKSSLCVDEKLFMQSLYKVLVSVSGKSSIILYIRDVDKIFLQSEQLYDLFHQMLGQLPGPVLILGSKIADEIKKPGGLPPWIGSSRKEEKSSEVDGRLAALFPYSIKIKPPEDETDLEDWKAQLKENKKTVECQDNRNYISEVLAANDVECKDLNSISHEDTKILRNHVEEIVVPAISYYLTNTKDPQYQNRKLVISSESLCHGLDLFRKKKGGDDRKKKETNGKKLSLEKKEINGKKEVSPDNPHERHIRSELIPPNEIGVTFSDIGALDEVKESLQELVMLPLRRPELFETGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTMTSNLFGEGEKHVRALFTLAAKVSPTIIFIDEVDSLLGRRAKHGEHEATRRIKNEFMTHWDGLLTKHREQILVLAATNRPFDLDDAIIRRFERRFLVGLPSLETREIILKTILAKENTENFDVKELAVMTEGYTGSDLKNLCTAAAYQPVRDLIKQEKLKDMENNKKEVESQSSEAASSPKKDSEEQDMNKKDAKGQSSQAASSPKEDPKEKGKNKKDSKGQSSEVDSSAKEDKEEPVINLRPINMEDMIQAKKQVPASFDAHGPIMYELKRWNELYGERISL 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0942 802 Gene3D - 446 700 IPR027417 -
Acco03g0942 802 Coils Coil 302 322 - -
Acco03g0942 802 MobiDBLite consensus disorder prediction 397 434 - -
Acco03g0942 802 Pfam ATPase family associated with various cellular activities (AAA) 487 617 IPR003959 GO:0005524|GO:0016887
Acco03g0942 802 MobiDBLite consensus disorder prediction 698 712 - -
Acco03g0942 802 Pfam AAA+ lid domain 639 682 IPR041569 -
Acco03g0942 802 MobiDBLite consensus disorder prediction 724 759 - -
Acco03g0942 802 MobiDBLite consensus disorder prediction 683 759 - -
Acco03g0942 802 ProSitePatterns AAA-protein family signature. 590 609 IPR003960 GO:0005524|GO:0016887
Acco03g0942 802 Coils Coil 678 698 - -
Acco03g0942 802 SMART AAA_5 483 620 IPR003593 GO:0016887
Acco03g0942 802 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 41 798 - -
Acco03g0942 802 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 442 666 IPR027417 -
Acco03g0942 802 Gene3D - 619 698 - -
Acco03g0942 802 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 446 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0942 Acco-ChrAcco03 19494359 19500148 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0942 447 678 Calmodulin-binding Proteins AT3G56690 38.983 1.32e-40 159