Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0940 ATGGAGCACAAGCAGGTTTTTCTGTCAGCATTGAGTGTTGGGGTTGGGATCGGAGCAGGCCTTGGGTTGAGCTCAGGGCTTGGAGTGATTCGTGAGTCTGGTGATAAGCTTTATGATGAACAGATTGAGCAGGAGCTTTTGAGGCTGCTGATTGATGGAAAGGAATGCGAGGAAACTTTTCAAGAGTTTCCTTTTTACTTAAGTGAAAAAACGCGAGAGTTATTGAAAAGCTCTGCATCTGTCCATTTAAGACAACATTTCTTTTCCAAACACACCCGGAACCTTTCTCCAGCAAGCAGAGCAATCCTGCTTTCTGGACCTGCAGAGTTTTACCTACAAGCCCTTGTCAAGGCTTTAGCTCATCACTTTGAATCAAAGTTGCTGCTGCTAGATGTAGTTGACTTCTCTTCCAAGATACAGAGCAAATATGGATATTCAAGAAAGGAACCATCTTCTATAATGTCCTTATCTGATGTGGCTTCCGAGAGAGTGTCTGGTTTGCTTGGATCATTTTCAGCCCGCTCTTCTAATGGAAAAACTAAAGGCACTTTCCAAAATCACAGTAATGCTACTGGAAGTCCCAATGTTACTTCAAAGCCTCATGGGAATGCTGCTTCCCAATCTGCTCCAGCAAATTCTGCTTCCTTGAAGCAGAAAAGCTGCTTGTGTGTCGATGAAAAACTCTTTATGCAGTCGCTTTATAAGGTCTTGGTTTCTGTGTCAGAAAAGAGTTCCATCATTTTGTACATCAGGGATGTTGACAAGATTTTCCTCCAATCAGAGCAACTGTATGATTTGTTTCATGAAATGCTAGGGCAACTTCCAGGGCCAGTGCTGATTCTTGGTTCCAAAATTGCAGACAAAATCAAAAAACCTCGAGGTCTCCCACCATGGATTATTTCCTCTCGCAAAGAGGAAAAATGTTCAAAAGTTGATGGAAGGCTCGCTGCATTATTCCCTTACAGCATTAAGATCAAAGCACCAGAAGATGAAACTGATCTTGAAAAATGGAAAGCCCAACTGAAAGAGAACAAGAAAACAATTAAGTGTCAAGATAACAGAAACCACATTGCTGAAGTACTAGCAGAAAATGATGTTGAATGTAACGACTTGAATTCAATCAGCCATGACGACACAAAGATACTAAGTAATCATATTGAAGAAATTGTGGTATCTGCTATATCTTATTACTTGACGAATACCAAGGATCCAGAATATCGGAACAGAAAGCTTGTAATATCATCTGAGAGTTTGCGCCATGGTTTGGATCTATTTCGCAAAACGAAAGATGGTGGTGATGATGATGGAAAGAAGAAAGAGACCAAGGGAAAGAAGGAAGTTAGTCCAGACAATTCCCATGAGAGGCACATAAGATCAGAACTTATACCAGCAAATGAGATAGGAGTGACATTTGCAGATATTGGTGCATTAGACGAAGTTAAGGAATCACTCCAAGAGCTAGTCATGCTTCCTCTTCGAAGACCAGAACTCTTCAAAACTGGACTTCTTAAGCCTTGTCGAGGTATATTGCTTTTTGGACCTCCAGGTACTGGAAAAACAATGCTTGCAAAGGCAATCGCAAATGAAGCAGGAGCTAGTTTCATCAATGTCTCCATGTCTACCATCACATCAATGTGGTTTGGAGAAGCTGAAAAGCATGTCCGAGCTCTGTTCACGCTGGCTGCAAAGGTTTCTCCAACTATTATTTTTATTGATGAGGTTGATAGCTTGCTCGGGCGACGAGCAAAATGTGGAGAGCATGAGGCTACAAGAAGGATTAAGAACGAATTCATGACCCATTGGGATGGTCTATTGACAAAACAGCGTGAGCGGATTCTTGTTCTTGCTGCAACCAATAGGCCATTTGACCTTGATGATGCAATCATAAGACGGTTTGAGCGAAGATTCTTGGTTGGTCTTCCATCTGTGGTGACTAGGGAGATCATATTGAAAACTATACTTGCTAAGGAAAATACTGAAAACTTAGACTTCAAAGAGCTTGCAGTCATGACAGAGGGATATACTGGGAGCGACCTCAAGAATTTGTGCACTGCTGCTGCTTATCGACCTGTCAGGGACCTACTAAAGCAGGAGAAATTGAAGGATAAGGAAAAGGATAAAAAAGAGGCTGAAGACCAAAGCTCAGAGGCTGCTTCAAGTTCTAAAAAGGATTCAGAAGAGCTAGACAAGAATGAGAAAGATGATGAAGGCCAAAGCTCGAAAGCTGCTTCAAGTCCCAAAGAGGATCCAAAAGAGAAAGACAAGAATGAGAAAGATGAAGGCCAAAGCTCAAAAGCTGCTTCAAGTCCCAAAGAGGATCCAAAAGAGAAAGGCAAGAATAAGAAAGATGCCAAGGGCCAAAGCTCAGAAGTTGATCCAAGTGCTAAGGAGGACAAAGAAGAGCCAGCAATTACCTTGAGGCCTATAAATATGGAAGACATGATTCAGGCTAAGAAACAGGTTCCTGCAAGTTTTGATGCTCACGGACCAATTATGCGTGATTTGAAGCAATGGGATGAGCTGTATGGAGAACGAATTTCCCTGTAG 2547 0.4197 MEHKQVFLSALSVGVGIGAGLGLSSGLGVIRESGDKLYDEQIEQELLRLLIDGKECEETFQEFPFYLSEKTRELLKSSASVHLRQHFFSKHTRNLSPASRAILLSGPAEFYLQALVKALAHHFESKLLLLDVVDFSSKIQSKYGYSRKEPSSIMSLSDVASERVSGLLGSFSARSSNGKTKGTFQNHSNATGSPNVTSKPHGNAASQSAPANSASLKQKSCLCVDEKLFMQSLYKVLVSVSEKSSIILYIRDVDKIFLQSEQLYDLFHEMLGQLPGPVLILGSKIADKIKKPRGLPPWIISSRKEEKCSKVDGRLAALFPYSIKIKAPEDETDLEKWKAQLKENKKTIKCQDNRNHIAEVLAENDVECNDLNSISHDDTKILSNHIEEIVVSAISYYLTNTKDPEYRNRKLVISSESLRHGLDLFRKTKDGGDDDGKKKETKGKKEVSPDNSHERHIRSELIPANEIGVTFADIGALDEVKESLQELVMLPLRRPELFKTGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSMWFGEAEKHVRALFTLAAKVSPTIIFIDEVDSLLGRRAKCGEHEATRRIKNEFMTHWDGLLTKQRERILVLAATNRPFDLDDAIIRRFERRFLVGLPSVVTREIILKTILAKENTENLDFKELAVMTEGYTGSDLKNLCTAAAYRPVRDLLKQEKLKDKEKDKKEAEDQSSEAASSSKKDSEELDKNEKDDEGQSSKAASSPKEDPKEKDKNEKDEGQSSKAASSPKEDPKEKGKNKKDAKGQSSEVDPSAKEDKEEPAITLRPINMEDMIQAKKQVPASFDAHGPIMRDLKQWDELYGERISL 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0940 848 Pfam AAA+ lid domain 661 702 IPR041569 -
Acco03g0940 848 Coils Coil 334 354 - -
Acco03g0940 848 Coils Coil 700 720 - -
Acco03g0940 848 Gene3D - 641 721 - -
Acco03g0940 848 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 468 643 - -
Acco03g0940 848 ProSitePatterns AAA-protein family signature. 612 631 IPR003960 GO:0005524|GO:0016887
Acco03g0940 848 Gene3D - 469 722 IPR027417 -
Acco03g0940 848 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 467 696 IPR027417 -
Acco03g0940 848 MobiDBLite consensus disorder prediction 177 211 - -
Acco03g0940 848 Pfam ATPase family associated with various cellular activities (AAA) 509 639 IPR003959 GO:0005524|GO:0016887
Acco03g0940 848 MobiDBLite consensus disorder prediction 699 806 - -
Acco03g0940 848 MobiDBLite consensus disorder prediction 424 454 - -
Acco03g0940 848 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 41 844 - -
Acco03g0940 848 SMART AAA_5 505 642 IPR003593 GO:0016887
Acco03g0940 848 MobiDBLite consensus disorder prediction 699 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0940 Acco-ChrAcco03 19474133 19480561 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0940 469 700 Calmodulin-binding Proteins AT3G56690 40.678 7.23e-43 166