Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0937 ATGAAGAAAGCAAGCGAACTTAGCATCATTTGTGGTGTTGACGTTGGGGCGATCGTTTTCAGAGGTCCCTCTGATCCTCAACCAGATGTTTGGCCAGAGCATGAACGGGTCCAGCAATTGATACGGAGGATTCAAGGTAGGCCTCTCTTGGAGAGGACATTGACCGGAGATGGAACAATCCAGGAGAGGATTAACAAAGGCAAAGAACTTCTGACGAGACGAAGAATGAAGAATCGTATGGAGGAGATTTCCCAACTTATGATCCTTTGTATGGCAGGGAAAGCAATGCCCGACCCCTCAGATTGGCATGATTTGAAGAAAGTAGTTGAGCAGAGCTTGAAGGACATAAAACCAAGTTCCAACCCCACCAACATCTGA 378 0.4683 MKKASELSIICGVDVGAIVFRGPSDPQPDVWPEHERVQQLIRRIQGRPLLERTLTGDGTIQERINKGKELLTRRRMKNRMEEISQLMILCMAGKAMPDPSDWHDLKKVVEQSLKDIKPSSNPTNI 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0937 125 Gene3D - 1 82 IPR036879 GO:0003677|GO:0046983
Acco03g0937 125 SUPERFAMILY SRF-like 1 63 IPR036879 GO:0003677|GO:0046983
Acco03g0937 125 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 1 23 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0937 Acco-ChrAcco03 19395482 19395859 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0937 6 117 Type I MADS-box Gene Family AT5G48670 31.356 7.99e-16 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Acco03g0937 SRF-TF 6.8e-07 No_clan