Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0933 ATGAAGAAAGCAAATGGGATAGTTATTTTATCTGTTATATTGAATCACTGCTTCTTCTTGTTTTGTGCAGCTTCTGACAGCATAACCATAAACAAACCCATAAGAGATGGTGATCTTCTAATTTCTAAGGAAAATTTGTTTGCTCTTGGGTTCTTCTCTCCCGGCAAATCAAGCAATCGCTTTGTAGGAATTTGGTACCACAATTTGCAGCAGCAAACATATGTTTGGGTTGCAAACAGAGACGATCCCGTAACTGATAACTCTGGTGTTCTCTCCATCAGCTCAGATGGAAACTTAGTTCTTCATGGTAACTACTCCAACAAGCCAATCTGGTCCACAAATGCTTCTGTCACTGTTCCAGGTACAACAGTTATGGCTCAACTCACAGATTTAGGTAACCTTGTTTTGTCTCAAAATGACTCTAAAACTGTTATATGGCAAAGCTTTGATCATCCCACCGATACTTTGCTTCCGTATGCCAATTTGGGAGTGAACAAAAGAACTGGCCAGAGCTGGTTCTTGCAGGCATGGAAGGCCGAGGAAGATCCTGGAACAGGAAACTTCTCCATCAAGTTTAATACAAGTGGAAAATCTCAGTTATTCATGTACAATAATTACGCACCGTGGTGGCGAGCAGGATCCTACAACGGCGAAAAGCTTATCGGTATCCCATTTATGAAAAGAGCAATGGCAACTTATTTTAAAATTACTGTCACGGATGATGATAATGAAGTTGGAGTTGTATTTCATGCTTATGACAAGAGAATCGTCTTGCGAGTGGTGGCTGTGCCATCTGGATTCTTCCAAGCTTTGCTATGGGATTTCAATAAGAATCAATGGAATCGATATTGGTCTGCTCCAGAAGTGGATTGTGATAGCTATGCCTCTTGTGGGGTCAATGGTAACTGTGATCCTCTTAATTATGCAAATTTTAGGTGCTCTTGCCTACCTGGGTTTGAACCCAAAAGCCCAACCAATTGGTATCAAAACAGTGATGCATCACAAGGTTGTATGAGGAAGGAAGGGTCATCCTTATGTGGGAATGGAGAAGGCTTTGTTAGAGTAGAAAGTGTTAAGATTCCTGATACTTCTGTGGCAAATGCAAATATGAATATGAGTTTGGAAGAATGTGAAAAAGAGTGCTTGAGAAACTGTTCTTGTAATGCCTATGCTGTTGCAGATGTGAGAAATGGTGGAAGTGGATGTTTGAGTTGGTATGGGACTTTGATGGATACTCAGATATTAAGTCAGGAAGGGCAGGATTTATTTGTTCGTGTTGATTCTATTGAACTTGCAAAATATGCTAGGAAATCAAAAGGAGCACTCACTATGTCTTGGAAAGTGGGAATTTCGGTGACGTTTGTCACTTTGGTTGCTATTCTTACTGCCTTATCAGTGTGTTTCTTTCGGAACAAAAAACGAAGAGATGCAATAAAGGAACAAGAATCAAAATTAAATTCCCCAATAGAAGAGCAAAATGGTGACAATAGAGCACAATCAAGCTTACCGTTTTTCAGCATCAAAACCATAATTACGGCAACAAACAATTTCTCAGATGAGAATCAATTAGGGCAAGGTGGATTTGGTTCTGTTTACAAGGGAATATTAGTTAATGGAGAAGAGGTAGCAGTGAAAAGATTGTCCGAAGGTTCTGGACAAGGGACTCTAGAGTTCAAGAATGAAATTAAACTAATTGCCAAACTACAACACAGGAACCTTGTGAAGTTGCTTGGATACTGCATTCATAAAGAAGAAAGGATGTTGATCTATGAGTACCTTCCCAATAAAAGTTTGAATTTCTTTCTCTTTGACAGGAACCAAAGAATGTCATTAGATTGGGATAAACGTTTCTCTATTATATTTGGAATTGCCCGAGGTCTTCTCTATCTTCATCAAGATTCAAGGCTCAAAATAATCCATAGAGACCTCAAAGCTAGCAATGTCCTCTTAGATGCTACAATGAATCCCAAGATTTCAGATTTTGGCATGGCTAGAATATTTGGAGAGGATCAAATCCAAGCAAGAACTAGACGAATTGTTGGGACATATGGTTACATGTCTCCAGAATACGCAATGGTAGGGGAATATTCAACAAAGTCTGATGTTTTCAGCTTTGGTGTTTTATTGTTAGAGATCATTAGTGGCAAGAGATGTACAGATTCTCATAAAGCAAAAGGAACCGTAAATTTGATTGGACAGGTATGGGACTTGTGGAAAGAAGGAAAAGCCTTAGAAATAGTGGATTCAACCCTTGGCGAATCATATCGTCTTGACATAGCCTTAAAGTGTATACAAATTGGTCTCTTGTGTGTGCAAGAAAGTGCCTTGTATAGGCCGTCCATGTTGGAAGTTGTTTTCATGCTTGGCAATGAAGTGAGCATTCCCTCACCTCACAAGCCTGCTTTCCTATTCAATCATAACATAGAGCATTCAGAATCTTCGGCATCTGGTGATCCTTCGGTAAACAATGTTTCCAATACTACAATTAGTGCTCGATAA 2499 0.3942 MKKANGIVILSVILNHCFFLFCAASDSITINKPIRDGDLLISKENLFALGFFSPGKSSNRFVGIWYHNLQQQTYVWVANRDDPVTDNSGVLSISSDGNLVLHGNYSNKPIWSTNASVTVPGTTVMAQLTDLGNLVLSQNDSKTVIWQSFDHPTDTLLPYANLGVNKRTGQSWFLQAWKAEEDPGTGNFSIKFNTSGKSQLFMYNNYAPWWRAGSYNGEKLIGIPFMKRAMATYFKITVTDDDNEVGVVFHAYDKRIVLRVVAVPSGFFQALLWDFNKNQWNRYWSAPEVDCDSYASCGVNGNCDPLNYANFRCSCLPGFEPKSPTNWYQNSDASQGCMRKEGSSLCGNGEGFVRVESVKIPDTSVANANMNMSLEECEKECLRNCSCNAYAVADVRNGGSGCLSWYGTLMDTQILSQEGQDLFVRVDSIELAKYARKSKGALTMSWKVGISVTFVTLVAILTALSVCFFRNKKRRDAIKEQESKLNSPIEEQNGDNRAQSSLPFFSIKTIITATNNFSDENQLGQGGFGSVYKGILVNGEEVAVKRLSEGSGQGTLEFKNEIKLIAKLQHRNLVKLLGYCIHKEERMLIYEYLPNKSLNFFLFDRNQRMSLDWDKRFSIIFGIARGLLYLHQDSRLKIIHRDLKASNVLLDATMNPKISDFGMARIFGEDQIQARTRRIVGTYGYMSPEYAMVGEYSTKSDVFSFGVLLLEIISGKRCTDSHKAKGTVNLIGQVWDLWKEGKALEIVDSTLGESYRLDIALKCIQIGLLCVQESALYRPSMLEVVFMLGNEVSIPSPHKPAFLFNHNIEHSESSASGDPSVNNVSNTTISAR 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0933 832 SMART serkin_6 517 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0933 832 Pfam S-locus glycoprotein domain 210 323 IPR000858 GO:0048544
Acco03g0933 832 ProSiteProfiles Protein kinase domain profile. 517 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0933 832 ProSiteProfiles EGF-like domain profile. 287 325 IPR000742 -
Acco03g0933 832 Pfam Protein tyrosine and serine/threonine kinase 520 731 IPR001245 GO:0004672|GO:0006468
Acco03g0933 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 593 795 - -
Acco03g0933 832 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Acco03g0933 832 CDD EGF_CA 290 323 - -
Acco03g0933 832 ProSiteProfiles Bulb-type lectin domain profile. 25 149 IPR001480 -
Acco03g0933 832 SMART ntp_6 347 426 IPR003609 -
Acco03g0933 832 Gene3D - 20 150 IPR036426 -
Acco03g0933 832 CDD PAN_AP_plant 347 426 - -
Acco03g0933 832 Gene3D Phosphorylase Kinase; domain 1 478 592 - -
Acco03g0933 832 SMART blect_4 31 152 IPR001480 -
Acco03g0933 832 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Acco03g0933 832 Pfam PAN-like domain 346 412 IPR003609 -
Acco03g0933 832 SUPERFAMILY Protein kinase-like (PK-like) 500 806 IPR011009 -
Acco03g0933 832 ProSiteProfiles PAN/Apple domain profile. 346 427 IPR003609 -
Acco03g0933 832 Gene3D Transferase(Phosphotransferase) domain 1 593 795 - -
Acco03g0933 832 Gene3D Hepatocyte Growth Factor 344 424 - -
Acco03g0933 832 CDD B_lectin 31 152 IPR001480 -
Acco03g0933 832 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 780 - -
Acco03g0933 832 Pfam D-mannose binding lectin 73 178 IPR001480 -
Acco03g0933 832 MobiDBLite consensus disorder prediction 811 832 - -
Acco03g0933 832 CDD STKc_IRAK 523 788 - -
Acco03g0933 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 149 - -
Acco03g0933 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Acco03g0933 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 482 592 - -
Acco03g0933 832 PIRSF SRK 2 832 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0933 Acco-ChrAcco03 19222573 19227024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0933 435 832 Receptor kinase-like Gene Family AT4G05200 48.905 7.00e-126 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g0933 PK_Tyr_Ser-Thr 2.6e-48 CL0016