Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0930 ATGGCCACCAGAATTGCGATCGTTCCCATTTGTCACAATTCTTGTGGGTATCTCAACATTGAAAATGTTTCTTGCCTCCTTTTGATTCTACCTCGTTTTGTCAACTGGTTCTGGGTTTTGTTTGTCGGATTCTGGTGGGAATTCTGGGTATGCTATGCGTTGACTAATTCTGGGTTCTGCAATTGTTTAGTCGTCAGAGGCTGCACAAAACAAGAAGCAGTGATGGATTATGACAGAAACAGTAACCATCCCATTTGCTATCTTCATCATCTTGTGACTTTGATTTCAGACATGCGACATGGTCATGGGTATCTGCCAAACTTCGAGACACAGAAGAACAAGACAAAAATGCTTAATAATGGGACACAATCAGTCGAACATTGTGGAGACGACAGATATACTTATAGTGTGGACCCACGTGGCCTTCCTCAGCTTCTTCTTCTCAAACGGAAGAAGAAGGTCTTCAGAAGTGGACCATGGTTTGAACAACAACTCAAAGGTGACTCAGCTCTTATGCAAAACCCAGTTTTCAAACCTGTTTTCGTTTTCGATTCTGATGAAGTGACTTTCACGTATGAAACTAAGGACAGTGTCACTTCAAGATTTGTACTTACTCAATCTGGTTTGATTCAGCACTTCTCATGGAGTGATCCTCATTCCAGTTGGATCCCAGAATTTGCAGTTCAAGGAGATCGTTGCGATGATTATGGCATTTGTGGCGCCTACGGTAGTTGCACCATAAAAGAATCTCCAATTTGCAAGTGTTTGGATGGATTTGAGCCTAAGTTACCTCAAGAATGGAGGAAAAATAAATGGTCAGATGGATGTGTTATAAAGAATTCTCACACTTGCGGAAATGGAGAGGGGTTCAAGAAGCTTAGAGGAGTGAAGCTGCCAGATTCTGCTGTGTTTCACATAAAGCCAACCATGAGTTTTGAGGAGTGTGAAGCAGAGTGCTTGAAGAATTGTTCATGTGTAGCTTATTCTAAACTAGATATCAACACAACTGGCAAAGGATGTGTTGCTTGGTTTGGAGGTTTATTCGATATCCGAGAGGTTGCAGATTTTGGGCAAGATCTGTACATCAGAGTTCCGGCTTCAGAACTTGGTTCAAATGCCGATGTTCCAAAAAGAAAGAAACATATAATAATTATAGTGGCTGTATCATTAAGTTCAGCAATTTTTGTCTTGGTATCATGGCTCATAATTAAGAGGTGGAGCAGAGGATGTACAGAGACAGATATTCAACTGATACTTAACAGATCTAGAAGTGAACTCCCATCATTCAAAATTGACATTATTGAAGCTGCAACAGAGAACTTCTCTGTCTGCAATAAGATTGGAGAAGGTGGATTTGGTCCTGTGTACAGAGGTAAACTTGCATCAGGACAAGAAATAGCTGTGAAAAGACTATCTGAAAGTTCAGGACAAGGCTTGCAAGAGTTCAAGAATGAGTACATGCCGAATCGGAGCTTAGACTCTTTACTATTTGATGAAACAAAGCGTTCGGCACTCACTTGGCAGAAGAGGCTGGATATTATTGTTGGAGTTGCAAGAGGAATCCTTTATCTTCACAGAGACTCAAGACTGAGAATAATTCATAGAGATTTGAAAGCCAGCAATGTTCTTTTAGATTGTGAAATGAATCCCAAAATATCTGATTTTGGAATGGCAAGAATATTTTGTAGAGATCAAACTGAAGCAAAGACCAACAGAGTAGTTGGAACCTACGGATATATGCCACCCGAGTATGCGATAGATGGACACTTCTCATTCAAATCTGATGTCTTCAGCTTTGGCGTTTTGCTATTAGAGCTGTTGAGTGGCAAGAAAAACAAAGGGTTTTTCCATCCAGATCACAAGCTGAATCTCCTTGGCCACGCATGGAAGCTTTGGACAGAAGAGAAGGCAATGGAGCTGATGGATCCATTACTTGAGAATCAGTTTCCTGAATCAGAAGCTCTAAGGTGTATCCAAGTGGGACTTTCTTGCGTTCAACATAACCCGGAGGACCGACCAACAATGTCACAAGTGATTTTGATGTTAGACAATGACAGCGTCTCGCTGCCACAACCTGGACGACCAGGAATGTATTCAGAGAGATGTTTCTCTGAGACAGATTCATCATCTCTTGCAGGAATCAATTCTTGTTCCAATAACACAAGCATCACCATACTGGAGGGTCGTTAG 2190 0.4132 MATRIAIVPICHNSCGYLNIENVSCLLLILPRFVNWFWVLFVGFWWEFWVCYALTNSGFCNCLVVRGCTKQEAVMDYDRNSNHPICYLHHLVTLISDMRHGHGYLPNFETQKNKTKMLNNGTQSVEHCGDDRYTYSVDPRGLPQLLLLKRKKKVFRSGPWFEQQLKGDSALMQNPVFKPVFVFDSDEVTFTYETKDSVTSRFVLTQSGLIQHFSWSDPHSSWIPEFAVQGDRCDDYGICGAYGSCTIKESPICKCLDGFEPKLPQEWRKNKWSDGCVIKNSHTCGNGEGFKKLRGVKLPDSAVFHIKPTMSFEECEAECLKNCSCVAYSKLDINTTGKGCVAWFGGLFDIREVADFGQDLYIRVPASELGSNADVPKRKKHIIIIVAVSLSSAIFVLVSWLIIKRWSRGCTETDIQLILNRSRSELPSFKIDIIEAATENFSVCNKIGEGGFGPVYRGKLASGQEIAVKRLSESSGQGLQEFKNEYMPNRSLDSLLFDETKRSALTWQKRLDIIVGVARGILYLHRDSRLRIIHRDLKASNVLLDCEMNPKISDFGMARIFCRDQTEAKTNRVVGTYGYMPPEYAIDGHFSFKSDVFSFGVLLLELLSGKKNKGFFHPDHKLNLLGHAWKLWTEEKAMELMDPLLENQFPESEALRCIQVGLSCVQHNPEDRPTMSQVILMLDNDSVSLPQPGRPGMYSERCFSETDSSSLAGINSCSNNTSITILEGR 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0930 729 ProSiteProfiles Protein kinase domain profile. 441 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0930 729 SMART serkin_6 441 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0930 729 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 487 690 - -
Acco03g0930 729 ProSiteProfiles PAN/Apple domain profile. 284 365 IPR003609 -
Acco03g0930 729 Gene3D Phosphorylase Kinase; domain 1 406 489 - -
Acco03g0930 729 SMART ntp_6 285 364 IPR003609 -
Acco03g0930 729 Gene3D Hepatocyte Growth Factor 281 360 - -
Acco03g0930 729 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 485 698 - -
Acco03g0930 729 SUPERFAMILY Protein kinase-like (PK-like) 424 694 IPR011009 -
Acco03g0930 729 ProSiteProfiles EGF-like domain profile. 229 265 IPR000742 -
Acco03g0930 729 Pfam S-locus glycoprotein domain 155 262 IPR000858 GO:0048544
Acco03g0930 729 CDD PAN_AP_plant 285 365 - -
Acco03g0930 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Acco03g0930 729 Pfam Protein tyrosine and serine/threonine kinase 485 680 IPR001245 GO:0004672|GO:0006468
Acco03g0930 729 PIRSF SRK 484 729 IPR024171 GO:0004674
Acco03g0930 729 PIRSF SRK 103 485 IPR024171 GO:0004674
Acco03g0930 729 Gene3D Transferase(Phosphotransferase) domain 1 490 689 - -
Acco03g0930 729 Pfam PAN-like domain 284 350 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0930 Acco-ChrAcco03 19062619 19072255 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0930 364 696 Receptor kinase-like Gene Family AT4G05200 46.196 2.63e-104 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g0930 PK_Tyr_Ser-Thr 2.6e-31 CL0016