Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0928 ATGACAGTATCTTCTGGCAAAGACCTTCTTCTGATCATCACTACTCTCTTATTCCTTCTCTTCCTTCTTCATCACGCATCTGGTCACTCTCTTAATAGAATAACCCCCAGTCAACCCCTCAGAGATGGCGACGTTTTGCTTTCCGACAAAGCCACTTTCGCCCTCGGTTTCTTCACTCTCACGAATAGTTCCAGAAATCGATATGTCGGAATCTGGTACAACAAAGTTTCAACACAAACTGTGGTTTGGCTTGCTAATCGAGAGAATCCTCTCAATGATACTTCTGGCGTTGTCTCCATCAAAACCCACGGAAACGTCGTCGTTTCCCTCGACGACGCAAGGACCGGCCTCAACCCGGTTTGGTCTTCCAATGGATCTTTCTCATCATCATCTTCCATCAATAATACCTTCGTTAAGCTTCTAGATACAGGAAACTTGGTTTTGATAGAAGATGGAGGAAGACAGAGAATTCTATGGCAGAGTTTTGATTATCCTTGTGACACCATGATGCCGTTTATGAGACTCGGGTTAGACCGGAAGACCGGTTTGAACCGCTTCCTGACGTCATGGAAATCCTCCGACGACCCAGGATTCGGGAACTTGAGTTATAGGATCGACCCGACAGGGTATCCTCAGTTATTTATGTACAGAAACGGGAATCCGATCTGGAGGGTCGGATCTTGGACGGGTCAAAGATGGAGCGGTGTACCCGATATGACACCCAACTTCATCTTCAGCGTAGCTTTTGTCAACAACGCTACTGAAGTTACCGTAATGTATGGTGTGAAGGACCCTTCTATTTTCACCAGAATGGTTCTTGAAAACTCCGGTCACGTGAGACGGACGACGTGGCAACCACAAGAACATCGATGGTTTGAGATCTGGAATGGTCCGAAAGAGGACTGTGACAACTTCAGGCGGTGCGGGTCAAATAGTAACTGTGACCCGTATAATACGGAGACGTTTGAGTGTGTGTGTCTGCCCGGATTTGAACCCAAGAACCCGAGAGAATGGTACCTCAGAGACGCGTCGGATGGGTGTGTGAGGAAGAAGAACGTGTCCACGTGTCGCAGCGGTGAGGGGTTTGTGAAGGTGGCGCTTGTGAAGGTGCCGGATACGTCCAAAGCGCGTGTGGATCTGAGCATTAGCATGAGAGAATGTAAGGAGCAGTGCTTGGGGGATTGTTCATGTGCGGCGTATACGCCTGCGAATGAGAGCTCATTAACTGGGTGTATGACGTGGCATGCTGACATGGAAGATATTAGAACGTACAGCAGTGTGGGACAGAATCTCTATGTACGTGTGGATGCACTTGAATTAGCTAAGTACAGAAAAAAGCCCTTTGGTTCGCTTGGCATGAAAGGGATGATTTCGCTCCTAGTCGTTTCCATATTACTAGTATTGTCTCTGGTTATATCTTTCATATATTGTCTTATAAAGAACAAGAAACAAGCGAGAAGGCGTAGCAAAAATTTGTTCAACTACAACGTTAACTTTGACAACTCTCCAAGTATGGATGACTTTAGCACTGGGAAAAATTCAGATTTACCATTATTTGATCTTATTGACATAGCTGCAGCAACTGAAAACTTCTCTGATGGTAACAAGCTTGGACAAGGTGGTTTTGGTTCGGTTTATAAGGGTTTGCTGAGTAATGGAATGGCAATAGCGGTTAAGAGGCTATCAAAATACTCTGGGCAAGGCATTGAAGAGTTCAAAAGTGAGGTTTTTTTAATTGCGAAGCTGCAACATAGAAATCTTGTGAGGATCTTGGGTTGTTGCATACAAGGAGAAGAGAAGATGTTGATCTATGAGTATTTGCCAAATAAAAGTTTGGACTTTTTCATATTTGATCAAGAAAGGAAGTTACAACTGAACTGGAGCAAACGGTTTGATATTATATGTGGGATTGCAAGAGGAATCTTATATCTTCATCAAGATTCAAGATTGAGAATCATTCATAGAGACTTAAAGGCTAGTAATGTCTTGTTGGACTCTAAATTAAATCCAAAAATCGCAGATTTTGGTATGGCTAGAATATTTGGTGGAGATCAAATTGAAGCAAACACAAAACGCGTTGTTGGAACCTATGGTTATATGTCACCTGAATATGCAATGGAAGGACTATTCTCGGTAAAATCTGATGTATATAGCTTTGGAGTGTTGCTTTTGGAGATTGTTACTGGCAAAAAGAATAGTGGTCATTATGAAGAAATTACCTCAAGTTTGGTTGGACATATTTGGGACCTATGGAGAGAAGGTAGAGCTATGGAGATTGTTGATTCATCATTTTTAGTAGAAGACGATGCTTGCCTTAATGATGTTCTAAAATGCATCCAAATTGGTCTTTTATGTGTACAAGACTATGCAGCTGACAGACCAACTATGTCAACAGTTGTTTCCATGTTGGGAAATGACTCATCTCTCCCTTCTCCAAAACAACCCGCTTTTATTGTCAAAAGAAATAAACTTGGTGACAAATCAAATCCATCAACCAGTGAAGGATTTAATTCAGTATATGAGATGACTACTACTGTAGTTGAAGCTCGCTAA 2553 0.4258 MTVSSGKDLLLIITTLLFLLFLLHHASGHSLNRITPSQPLRDGDVLLSDKATFALGFFTLTNSSRNRYVGIWYNKVSTQTVVWLANRENPLNDTSGVVSIKTHGNVVVSLDDARTGLNPVWSSNGSFSSSSSINNTFVKLLDTGNLVLIEDGGRQRILWQSFDYPCDTMMPFMRLGLDRKTGLNRFLTSWKSSDDPGFGNLSYRIDPTGYPQLFMYRNGNPIWRVGSWTGQRWSGVPDMTPNFIFSVAFVNNATEVTVMYGVKDPSIFTRMVLENSGHVRRTTWQPQEHRWFEIWNGPKEDCDNFRRCGSNSNCDPYNTETFECVCLPGFEPKNPREWYLRDASDGCVRKKNVSTCRSGEGFVKVALVKVPDTSKARVDLSISMRECKEQCLGDCSCAAYTPANESSLTGCMTWHADMEDIRTYSSVGQNLYVRVDALELAKYRKKPFGSLGMKGMISLLVVSILLVLSLVISFIYCLIKNKKQARRRSKNLFNYNVNFDNSPSMDDFSTGKNSDLPLFDLIDIAAATENFSDGNKLGQGGFGSVYKGLLSNGMAIAVKRLSKYSGQGIEEFKSEVFLIAKLQHRNLVRILGCCIQGEEKMLIYEYLPNKSLDFFIFDQERKLQLNWSKRFDIICGIARGILYLHQDSRLRIIHRDLKASNVLLDSKLNPKIADFGMARIFGGDQIEANTKRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVTGKKNSGHYEEITSSLVGHIWDLWREGRAMEIVDSSFLVEDDACLNDVLKCIQIGLLCVQDYAADRPTMSTVVSMLGNDSSLPSPKQPAFIVKRNKLGDKSNPSTSEGFNSVYEMTTTVVEAR 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0928 850 CDD EGF_CA 301 334 - -
Acco03g0928 850 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 794 - -
Acco03g0928 850 SMART ntp_6 357 435 IPR003609 -
Acco03g0928 850 Gene3D Transferase(Phosphotransferase) domain 1 607 813 - -
Acco03g0928 850 Pfam Protein tyrosine and serine/threonine kinase 534 803 IPR001245 GO:0004672|GO:0006468
Acco03g0928 850 SMART serkin_6 531 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0928 850 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 607 811 - -
Acco03g0928 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Acco03g0928 850 ProSiteProfiles EGF-like domain profile. 298 336 IPR000742 -
Acco03g0928 850 Gene3D - 28 162 IPR036426 -
Acco03g0928 850 Pfam PAN-like domain 356 421 IPR003609 -
Acco03g0928 850 SMART blect_4 37 165 IPR001480 -
Acco03g0928 850 Pfam D-mannose binding lectin 80 191 IPR001480 -
Acco03g0928 850 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 196 IPR036426 -
Acco03g0928 850 CDD STKc_IRAK 537 803 - -
Acco03g0928 850 ProSiteProfiles Protein kinase domain profile. 531 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0928 850 Gene3D Phosphorylase Kinase; domain 1 498 606 - -
Acco03g0928 850 ProSitePatterns Protein kinases ATP-binding region signature. 537 559 IPR017441 GO:0005524
Acco03g0928 850 CDD B_lectin 37 165 IPR001480 -
Acco03g0928 850 PIRSF SRK 5 850 IPR024171 GO:0004674
Acco03g0928 850 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 162 - -
Acco03g0928 850 ProSiteProfiles Bulb-type lectin domain profile. 31 161 IPR001480 -
Acco03g0928 850 Pfam Domain of unknown function (DUF3403) 805 850 IPR021820 GO:0004674
Acco03g0928 850 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 497 606 - -
Acco03g0928 850 ProSiteProfiles PAN/Apple domain profile. 356 436 IPR003609 -
Acco03g0928 850 SUPERFAMILY Protein kinase-like (PK-like) 515 803 IPR011009 -
Acco03g0928 850 CDD PAN_AP_plant 354 435 - -
Acco03g0928 850 Pfam S-locus glycoprotein domain 223 334 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0928 Acco-ChrAcco03 18968720 18975407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0928 458 820 Receptor kinase-like Gene Family AT4G23230 54.743 1.35e-125 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g0928 PK_Tyr_Ser-Thr 9.4e-48 CL0016