Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0911 ATGGGTGAGGAATTTGAATCTGGGATTTGTGGTGGGAATACTACTAATAATAATTACTGGTGGATCAACAACAACAACAACATGATGATGATGATGAACCCAACAACAACGAGAAGTGTTTTTCCTTTGACGATGAGTTCATCTCCTTGTTCTGTTCTCACAGCTAACAACGATCTCTCTGGAGGAGGCATGATCAGCCACAGCTCATGGCAGACTGATACGGTGGACTTGAAGGCCCCGGCCGCTGCGGGAACGGCCACGGTGACCTCTTGTTCTGATATCTCTCTGGGGTTTCTCGATGCTGCGACGACGACCGCGGCCACGACGAAGCCGCTGTTTCAGAATCATTTTCATCATCATCATCCTGATGAAGCTGACAAAAATAATAATCACCATCATAATGGTTCTATCTTGATGGATTCTTCTTCCTTGGATATGATCATGGCTTGGAATAATTCCCTCTTTGGTAATTCTTCTACACAAAGCCAAGATCAGAAGAGAGAGATGTCCACAAAGAATCAAGATTTATGTGGTGGTGGTAACAATAATTTCTCAATTGGCTCATATGATATCAATAATTGCTCAAGTTCTTCATCAACCTTGATTCAGAGTCTGTATGATATTAATAATAATCCTCAACCACAACAGTCACTTTTCACCAACCCACCATCTAATTCCATGGCCTATTCTTCAAGTACACCAAATAATTATGGCGCCATCTCATATTCCACTACTACTGATCAATTTACCACTACCACTTCTTCGTCGTCTTTGCCATCGTCTTCATCTTCTTCATGGTCCAGACCCTCTAATGGTGGCGGCTTGCACTTCTCCAACTGTACTCCTTTCTGGAATGCTTCTGCTGAAACCCCACATCATGTTTTTGCTCCTTCTTTAATCTCTGAGAAACCCAATTTCACCAGCTCGCTCATACCCAAGCCCAAGAGAGAAGAAGTTTCGGACTCGGCACAGAAAAGTTCGTGTGAACCTGCAATAAAGAAGCAAAGAATTGAAACCCCATCTCCATTACCTACTTTTAAGGTTCGGAAAGAGAAGCTGGGGGACCGAATCACTGCTCTTCAGCAATTGGTGTCGCCTTTTGGAAAGACTGATACTGCATCTGTTCTTCACGAAGCCATTGAGTACATCAAGTTCCTGCATGATCAAGTTTTGAGCACTCCTTATATGAAAAATGGAGTTCCCATCCAACACTGCCAACAGGGTTGTAATGTGAAGGAGTTATCAGAAGGGCCAAAACAAGACCTGAGAATCAGAGGGCTGTGTTTGGTTCCGATTTCAAGCACATTCCCAGTCACAAACGAAACCCCTGTGGATTTCTGGACACCATCATTTGGAGGCACACTCATCAGATAA 1374 0.4352 MGEEFESGICGGNTTNNNYWWINNNNNMMMMMNPTTTRSVFPLTMSSSPCSVLTANNDLSGGGMISHSSWQTDTVDLKAPAAAGTATVTSCSDISLGFLDAATTTAATTKPLFQNHFHHHHPDEADKNNNHHHNGSILMDSSSLDMIMAWNNSLFGNSSTQSQDQKREMSTKNQDLCGGGNNNFSIGSYDINNCSSSSSTLIQSLYDINNNPQPQQSLFTNPPSNSMAYSSSTPNNYGAISYSTTTDQFTTTTSSSSLPSSSSSSWSRPSNGGGLHFSNCTPFWNASAETPHHVFAPSLISEKPNFTSSLIPKPKREEVSDSAQKSSCEPAIKKQRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVLSTPYMKNGVPIQHCQQGCNVKELSEGPKQDLRIRGLCLVPISSTFPVTNETPVDFWTPSFGGTLIR 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0911 457 MobiDBLite consensus disorder prediction 249 271 - -
Acco03g0911 457 CDD bHLH_AtbHLH_like 343 390 IPR045239 -
Acco03g0911 457 MobiDBLite consensus disorder prediction 212 232 - -
Acco03g0911 457 MobiDBLite consensus disorder prediction 306 330 - -
Acco03g0911 457 MobiDBLite consensus disorder prediction 157 176 - -
Acco03g0911 457 Gene3D - 347 398 IPR036638 GO:0046983
Acco03g0911 457 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 337 386 IPR011598 GO:0046983
Acco03g0911 457 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 347 392 IPR036638 GO:0046983
Acco03g0911 457 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 147 437 - -
Acco03g0911 457 FunFam Transcription factor bHLH123 family 347 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0911 Acco-ChrAcco03 18636615 18640269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0911 278 457 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 56.085 1.64e-53 182