Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0895 ATGAAGCCTTCTTCATATTACAGTCTGCTGCTCCTGTCTGTGCTTTCTCAATCCCTCCATTGTTGCTGCCAGGGAGACCTTAACACCATCTTAGATTGCTCTTTCAACGACACATATAGACTAGGACATAACTGCAACAGCCTCCAAAAGGCATGCACCTCCTTCGTAACGTTCAGATCCAATCCGCCCTATAATACCCCTCTAAGCGTTGCCAATCTTCTTGGCTCTGAAGTATCTTCCATAGCCTCCATCAACAACATACCAAACAACACCAAGCACCACATTCCTTCCAATCAAGTTGTTATTGTTCCAATTGATTGTTCCTGTTTGGGTGGTATTTACCAGCATGTCATTTCTTATACATTGAAGATGGGTGACACCTTCTTTTTGGTGGCCAACAGTACTTATCAAGGCCACGCCATTTGCCAGATGGTGCTCCGGCAAAATTACGCAGCTGACCACGTCAATCTCACTATTGGTGAAGAAATTTCAGTTCCAGTCTTGTGCGCTTGTCCCGCTGCTGACCAAATCTCAGATGGGGTCTCCTCCCTGCTAGTTCACTCAATTTCTGTAGGGGAGACACCTAACTTAATTGCACAGGCCTATGGCGTGAATCTACAGACTCTGTTGACTACTAACCAGTTGAGTTCAAACACCACTCTCTATCCCTTCACAACTCTCTTAGTTCCCCTCAAGCCCTCCTCTTGCAAACTCAATCCGCATTTATTCTACTGCACCTGTTCATTCTCCCAGAAATACCTTCCAAATTCAAGTTTCAACACTCTTGAGTGTGATCATATTCAACCCGATCCTCACCGTTTCCCCGTCAAATTGGTTGCTTCTCTAGGTGTTGGTATTGGTGTTGGCCTTCTGAGCTTATTTCTTTTGGGTCACAAGTTATATCAATACCTAAGACAAAAGCAAGAAATAGTACGTAAGGAAAAATTGTTCAAGCAAAATGGTGGCCATTTGCTACAAGAAAAGATGTCATGTTATGGTAACGGAGACAAAGCAAGACTTTTTACGGCAGAAGAGCTGGAACGAGCAACAGATAACTACAATCAAAGTAGGTTTCTTGGTCAAGGTGGGTTTGGAACTGTTTATAAAGGAATGTTACCAGATGGCACCATTGTTGCAGTTAAGAAGGCAAAAGAAATTGTGAGAAGCCAGATTGAGACTTTCATTAATGAAGTGGTGATTCTATCCCAAATAAACCACAGGAACATCGTCAAGCTCTTGGGTTGGTGCCTAGAGACTGAAGCCCCATTATTAGTATATGAATTTATTCCCAATGGAACACTTTCTCATCACATCCATAACCAGGAACTTGAAGGAAAGCTTTCATGGGACACCCGCCTCAGAATTTCTTGTGAGGTTGCTGGGGCAGTGGCCTATATGCATTCTGCAGCTTCCATTCCCATTTTTCATAGAGACATCAAGACTTCCAACATACTCCTGGATCATAAGTACAGTGCCAAAGTATCTGATTTTGGGACTTCAAGGTCAGTCCCAGATGATAGGACTCACTTAACCACAATGGTGCAAGGCACTTTTGGGTACATTGATCCTGAATACTTCCGATCCAGTCAATTCACAAACAAAAGTGATGTATATAGTTTTGGGGTTGTGCTTATCGAACTCATTTCTGGAAGGAAACCCATTACCATCTCAGACGAAGATCAAGGTCGGAACCTTGTCGCAGAATTTATTGCTTTGATGAAGGAGGACCGAGTTTTTGAGATTTTAGATGCTAGAGTTGTTCATGAAGGAAGGAAAGATGATATTCTTAGTGTCGTGAATCTAGCAAAGAGATGCGTGAGACTCAATGGGAAGAAGAGACCCACAATGCAGGAGGTTTCAGCAGAGCTAGAAGGACTGAGAAAGACACAAAATTCTTTAGAGATCAATGATTGTTCTCTTGAGTTTCCGCATATGTGTGTCACTCCTTCTGAATCAGACCAAGAATCCACAGAAGAAAGCATGTCATCAATTTTCCAAATAGACTCCACACCCATCTGA 2019 0.4274 MKPSSYYSLLLLSVLSQSLHCCCQGDLNTILDCSFNDTYRLGHNCNSLQKACTSFVTFRSNPPYNTPLSVANLLGSEVSSIASINNIPNNTKHHIPSNQVVIVPIDCSCLGGIYQHVISYTLKMGDTFFLVANSTYQGHAICQMVLRQNYAADHVNLTIGEEISVPVLCACPAADQISDGVSSLLVHSISVGETPNLIAQAYGVNLQTLLTTNQLSSNTTLYPFTTLLVPLKPSSCKLNPHLFYCTCSFSQKYLPNSSFNTLECDHIQPDPHRFPVKLVASLGVGIGVGLLSLFLLGHKLYQYLRQKQEIVRKEKLFKQNGGHLLQEKMSCYGNGDKARLFTAEELERATDNYNQSRFLGQGGFGTVYKGMLPDGTIVAVKKAKEIVRSQIETFINEVVILSQINHRNIVKLLGWCLETEAPLLVYEFIPNGTLSHHIHNQELEGKLSWDTRLRISCEVAGAVAYMHSAASIPIFHRDIKTSNILLDHKYSAKVSDFGTSRSVPDDRTHLTTMVQGTFGYIDPEYFRSSQFTNKSDVYSFGVVLIELISGRKPITISDEDQGRNLVAEFIALMKEDRVFEILDARVVHEGRKDDILSVVNLAKRCVRLNGKKRPTMQEVSAELEGLRKTQNSLEINDCSLEFPHMCVTPSESDQESTEESMSSIFQIDSTPI 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0895 672 CDD STKc_IRAK 359 626 - -
Acco03g0895 672 SMART serkin_6 353 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0895 672 CDD LysM 192 229 IPR018392 -
Acco03g0895 672 Pfam LysM domain 192 230 IPR018392 -
Acco03g0895 672 MobiDBLite consensus disorder prediction 649 672 - -
Acco03g0895 672 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 104 631 IPR045274 GO:0007166
Acco03g0895 672 Coils Coil 616 636 - -
Acco03g0895 672 ProSiteProfiles Protein kinase domain profile. 353 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0895 672 SUPERFAMILY LysM domain 185 230 IPR036779 -
Acco03g0895 672 FunFam Wall-associated receptor kinase 2 324 428 - -
Acco03g0895 672 Gene3D Phosphorylase Kinase; domain 1 326 428 - -
Acco03g0895 672 ProSitePatterns Protein kinases ATP-binding region signature. 359 382 IPR017441 GO:0005524
Acco03g0895 672 SMART LysM_2 186 230 IPR018392 -
Acco03g0895 672 ProSiteProfiles LysM domain profile. 185 229 IPR018392 -
Acco03g0895 672 Pfam Protein tyrosine and serine/threonine kinase 356 623 IPR001245 GO:0004672|GO:0006468
Acco03g0895 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Acco03g0895 672 Gene3D Transferase(Phosphotransferase) domain 1 429 642 - -
Acco03g0895 672 FunFam Wall-associated receptor kinase 2 429 642 - -
Acco03g0895 672 SUPERFAMILY Protein kinase-like (PK-like) 337 623 IPR011009 -
Acco03g0895 672 Gene3D LysM domain 178 238 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0895 Acco-ChrAcco03 18192665 18195552 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0895 283 629 Receptor kinase-like Gene Family AT1G16130 56.734 4.37e-136 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Acco03g0895 PK_Tyr_Ser-Thr 1.1e-49 CL0016