Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0892 ATGAACAGGAAACTCTTGCCCTTAATAGTAGGGATTTGTGTAGGCTTTGTCTTTGGAGTGGGTGTGACAATTGCATTTGTATGCTGCTTCTGGTGCCGAAATAGGCTCAATAGAAGCTCTGAGAAATCAGGAAACATCCCTGTTCGCGTCAAGGTAGTTGATTCTGGTGCATCATTGTCAAGCTCAAATGTGGGGCTGGAGTCATCTGTATCATCTGACTGGGGTAACATGCCTCTTTCGTTGGAAGGACTTCAGAGGAAGGATGTTGGTTCTGCATGCGGAATTCCAAAGTACTCTTACAAATATATGCAGAAAGCAACGTCTAATTTCACAACCATCATAGGTCGTGGAGCATTTGGTTCAGTTTACAAAGCCCTGATGCTCACCGGTGAAACAGTTGCCGTTAAAGTTCTTGGTAATAATTCAAAACATGGAGAGAGGCAGTTTTTGACCGAGGTCTTGTTACTTGGAAGACTACACCACAAAAACCTTGTGGATTTGGTGGGATATACTGCAGAAAGAGGACATCATATGCTCCTTTACGCTTATATGAGCAATGGCAACCTCGCCTCTCACTTATATGGCAAAAATCAGGAGCCGTTAAGCTGGGACGCAAGATTTCAGATAGCACTAGATGTTGCAAGGGGACTGGAATATCTACATTATGGGGCTTCTCCCCCTGTTGTTCACCGTGACATTAAATCTTCCAACATACTGCTGGACCAGTTTACGAGAGCCAAGGTAACTGACTTTGGGCTTTCTAGACCAGAGATGATTAAACGTCGTTCATCTCATGTCCAAGGAACTTTTGGCTATCTTGATCCTGAATACATGTCTACAAAAACTTTTACCAAGAAAAGTGATGTTTATAGTTTTGGTGTGCTACTCTTTGAACTGATTACTGGCAGGAATCCACAGCAGGGCCTGATGGAATATGTGAAACTAGTAAGTGCTAATGCTATGTTGGACGCAGCCATGGAAGCTGAGAGTAAGGTTGGATGGGAAGAAATTGTGGATTCACAGCTTAATGGAAAATATGATGTGCACAGGCTTAATGATATGGCTGCACTTGCTTTGAAATGTGTCAATGAAGCATCCAGAGATCGACCTTCCATGAGGGACATTGTTGGATCATTATCTCAGCTCTGTAAGAAGACGCATTGTGAAAATGATAATATAAAGTTTCCTTCTGCAGTCAATGAAATTTCCATTGAATTGGGTTAA 1224 0.424 MNRKLLPLIVGICVGFVFGVGVTIAFVCCFWCRNRLNRSSEKSGNIPVRVKVVDSGASLSSSNVGLESSVSSDWGNMPLSLEGLQRKDVGSACGIPKYSYKYMQKATSNFTTIIGRGAFGSVYKALMLTGETVAVKVLGNNSKHGERQFLTEVLLLGRLHHKNLVDLVGYTAERGHHMLLYAYMSNGNLASHLYGKNQEPLSWDARFQIALDVARGLEYLHYGASPPVVHRDIKSSNILLDQFTRAKVTDFGLSRPEMIKRRSSHVQGTFGYLDPEYMSTKTFTKKSDVYSFGVLLFELITGRNPQQGLMEYVKLVSANAMLDAAMEAESKVGWEEIVDSQLNGKYDVHRLNDMAALALKCVNEASRDRPSMRDIVGSLSQLCKKTHCENDNIKFPSAVNEISIELG 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0892 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Acco03g0892 407 PANTHER OS01G0750732 PROTEIN 19 391 - -
Acco03g0892 407 SUPERFAMILY Protein kinase-like (PK-like) 94 379 IPR011009 -
Acco03g0892 407 Pfam Protein tyrosine and serine/threonine kinase 110 378 IPR001245 GO:0004672|GO:0006468
Acco03g0892 407 CDD STKc_IRAK 114 382 - -
Acco03g0892 407 FunFam calcium/calmodulin-regulated receptor-like kinase 1 184 400 - -
Acco03g0892 407 SMART serkin_6 108 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0892 407 Gene3D Transferase(Phosphotransferase) domain 1 184 402 - -
Acco03g0892 407 ProSiteProfiles Protein kinase domain profile. 108 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0892 407 ProSitePatterns Protein kinases ATP-binding region signature. 114 136 IPR017441 GO:0005524
Acco03g0892 407 Gene3D Phosphorylase Kinase; domain 1 92 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0892 Acco-ChrAcco03 18134044 18148170 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0892 99 376 Receptor kinase-like Gene Family AT1G67720 45.070 2.64e-72 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Acco03g0892 PK_Tyr_Ser-Thr 1.1e-49 CL0016