Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0888 ATGGCCGTCTCATTTGCGTGGATGTTTGGTGAAACAAAGCCCAGCAGAAAAGATCTTCTTGGTATTTTGGTTCCGAAACTAAGCTCCATAACAATACAGAAGGCTGTTGGAGTTGTGGGTTGCATTATTATGCCTCACAATGTATTCTTGCACTCTGCACTTGTTCAGTCAAGACAGTGGAAAAGTGGCCTGCACAAAGATGATGTCACAGAAAATCACTTTTTTGTGGGTGGTCTTGCATATTACATCACAGCACCATCTTTCTTAGATGATATGGCAGCCAACCCTTTCCATGCTCTGTTCTATTTGATGTTTATGTTGTCAACCTACGCTTTGTTCTCTAAGACTTGGATTAAAGTCTATGGATCATCAGCTAAAGATGTTGCCAAACAATTGAAGCTACACAAGCTCAACACCGATGATATTCATAAAAGCATAAAATATAGTGTCTGGGCAAGCACTTCTAATGGCAAGAAAAAGCTAAATGCAACATATGAAGAAGCCAAGGAGAAACTTGGTGGTTGTCCTGTATTTTTGTTGTTTTCGGTTAATTCTAGCGGTCAGTTTGTTGGTTTAGCAGAGATGGTGGGTCCTGTTGATTATGAAAGTAATGTCGAATACTGGTAG 627 0.4003 MAVSFAWMFGETKPSRKDLLGILVPKLSSITIQKAVGVVGCIIMPHNVFLHSALVQSRQWKSGLHKDDVTENHFFVGGLAYYITAPSFLDDMAANPFHALFYLMFMLSTYALFSKTWIKVYGSSAKDVAKQLKLHKLNTDDIHKSIKYSVWASTSNGKKKLNATYEEAKEKLGGCPVFLLFSVNSSGQFVGLAEMVGPVDYESNVEYW 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0888 208 Pfam YT521-B-like domain 136 202 IPR007275 GO:0003723
Acco03g0888 208 CDD YTH 137 204 IPR007275 GO:0003723
Acco03g0888 208 Gene3D ph1033 like domains 123 208 - -
Acco03g0888 208 Pfam Natural resistance-associated macrophage protein 1 68 IPR001046 GO:0016020|GO:0030001|GO:0046873
Acco03g0888 208 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 137 208 IPR045168 -
Acco03g0888 208 ProSiteProfiles YTH domain profile. 129 208 IPR007275 GO:0003723
Acco03g0888 208 SUPERFAMILY Preprotein translocase SecY subunit 42 134 IPR023201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0888 Acco-ChrAcco03 18034760 18037968 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0888 1 59 Inorganic Solute Cotransporters AT2G23150 85.000 2.62e-26 103