Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0886 ATGAAAGATTTATTTGACTCCTTTATAACTATTTTATGTGTTGAAGATTTAGGCAAAAATCAGGAGCCGTTAAACTGGGACGCAAGATTTCAGATAGCACTAGATGTTGCAAGGGGACTGGAATATCTACATTATGGGGCTTCATCTGTTGTTCACCGTGATATTAAATCTTCCAACATACTGTTGGACCAGTTTACGAGAGCCAAGTTAGCCATGGAAGCTGAGAGTAAGGATGGATGGGAAGAAATTGTGGATTCACGGCTTAATGGAAAATATGATGTGCATAGGCTTAATGATATGGCTGCTCTTGCTTTGAAATGTGTCAATGAAGCATCCAGAGATCGACCTTCCATGAGGGACATTGTTGCATCATTATCCCAGCTCTGTAATAAGACGCATTGTGAAAATGATAATATAAAGTCTTCTTCTGCAGTAAATGAAATTTCCATTGAATTGGGTTAA 462 0.3831 MKDLFDSFITILCVEDLGKNQEPLNWDARFQIALDVARGLEYLHYGASSVVHRDIKSSNILLDQFTRAKLAMEAESKDGWEEIVDSRLNGKYDVHRLNDMAALALKCVNEASRDRPSMRDIVASLSQLCNKTHCENDNIKSSSAVNEISIELG 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0886 153 Gene3D Transferase(Phosphotransferase) domain 1 8 71 - -
Acco03g0886 153 Pfam Protein kinase domain 28 70 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0886 153 ProSitePatterns Serine/Threonine protein kinases active-site signature. 50 62 IPR008271 GO:0004672|GO:0006468
Acco03g0886 153 SUPERFAMILY Protein kinase-like (PK-like) 17 129 IPR011009 -
Acco03g0886 153 Gene3D Transferase(Phosphotransferase) domain 1 72 150 - -
Acco03g0886 153 PANTHER OS01G0750732 PROTEIN 9 71 - -
Acco03g0886 153 ProSiteProfiles Protein kinase domain profile. 1 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0886 Acco-ChrAcco03 17967312 17968648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0886 18 71 Receptor kinase-like Gene Family AT3G21630 63.636 3.00e-15 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Acco03g0886 Pkinase 1.1e-08 CL0016