Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0851 ATGCAGCGAGCCGGACCTCCTCTTCCTCCCCAGAAGTTGCAGTTCCTCTTAGTTGGCACTGATGAAGAAACCGAAAGACGAATTGGGAAACGGCTTTCAGATTCTCATTATCAAATCATTACACGTCCCTCTTTTAGTTCAGCCTTAGACTTGTTTTTAAAAGGAAATTTTGACGTTGACTTGGTGCTCACTGATGTCTCTTTGAAAGTCGAGGATGGGCTGAATGGTTACGAATTCATCGCCCAAATCAAGCACTTGAGAAAAAATATTCCCCAAGTCGTAATATTTGACCCTGAGGGATTATCTCATCATGAGATCATCGAGAAAATCGAGAAGTTTTTCACGAATCTTGTTACTCCTCAACAAGAAATTCTAAAAAGAGGATACGAGTTTATGAATCATGGTGAAGAACTTTCTTTCGGAAAACAACGGATCGTTTGGGATGAGGAACTAGATGCCCTGTTTGTTGAAGTTTTTAATTCCCTTGGAAAAGACGATCAGGTGCCTACACAAATTCTTAAAGATATGAAAGAGCGTAGTCCTCGTCTGACGACAGGTCTGAATAGAGAACATGTTGGGAGTCACCTACAGAAACACAGGGATAAAGTGAAGAAAAAAGCACGACGCATGAATTATGCAAATGAAAGGAATGCGATGACTGTGAATCAAAACCCATCTTCAGGGTCTAACCAAAACTATGGTCTAGGTACTTCCTTTCAAGGGACTTCTGGTACGCAGCAACTAGATCAAAACCCAAACCCAAGTATGCAACAACTAGATCAAAACCCATCTTCAGGGTCTGGAATCATAAACCAAAACTATGGTCTAGGTACTTCCTTTCAAGGGACTTCTGGTACGCAGCAACTAGATAAAAACCCAAACCCAGGTATGCAGCAACTAGATCAAAACCCATCTTCAGGGTCTGGAATGATAAACCAAAACTATGGTCTAGGTACTTCCTTTCAAGGGACTTCTGGTACGCAGCAACTAGATCAAAACCCATCTTCAGGGTCTGGAATCAGAAACCAAAACCATGGTCTAGGTACTTCCTTTCAAGGAATGAATATGGAGCAAGAACCCATAACTCAGAATTTGACTAATACGCAGCAACTAGATCAAACTCCTCATGATCTTTATGCTGCTATAAGAACTGGTCATGATAGAATGATCACGTTAGAAGAAACACTTGGAGATGAGTTTGGGTCTGGTATCTTTAATCAACAGTTATTTGAGGTTGGTCCTGATGCTCAATCGTCTGATGCACCTGATATTTTTCCAAGTCATGAAGATGGAGGCTACTTGGATGCTTTCCAAGAGATGGATGCTTTCCCAGAATTGGATGCTCTTTTCCAAGAGAAGAACGAGATGAAGCCATCACAGCCTCCAAATAAATAA 1395 0.4129 MQRAGPPLPPQKLQFLLVGTDEETERRIGKRLSDSHYQIITRPSFSSALDLFLKGNFDVDLVLTDVSLKVEDGLNGYEFIAQIKHLRKNIPQVVIFDPEGLSHHEIIEKIEKFFTNLVTPQQEILKRGYEFMNHGEELSFGKQRIVWDEELDALFVEVFNSLGKDDQVPTQILKDMKERSPRLTTGLNREHVGSHLQKHRDKVKKKARRMNYANERNAMTVNQNPSSGSNQNYGLGTSFQGTSGTQQLDQNPNPSMQQLDQNPSSGSGIINQNYGLGTSFQGTSGTQQLDKNPNPGMQQLDQNPSSGSGMINQNYGLGTSFQGTSGTQQLDQNPSSGSGIRNQNHGLGTSFQGMNMEQEPITQNLTNTQQLDQTPHDLYAAIRTGHDRMITLEETLGDEFGSGIFNQQLFEVGPDAQSSDAPDIFPSHEDGGYLDAFQEMDAFPELDALFQEKNEMKPSQPPNK 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0851 464 Gene3D - 141 206 - -
Acco03g0851 464 MobiDBLite consensus disorder prediction 188 352 - -
Acco03g0851 464 Gene3D - 14 118 - -
Acco03g0851 464 SUPERFAMILY CheY-like 12 95 IPR011006 -
Acco03g0851 464 NCBIfam myb-like DNA-binding domain, SHAQKYF class 142 202 IPR006447 GO:0003677
Acco03g0851 464 SUPERFAMILY Homeodomain-like 140 205 IPR009057 -
Acco03g0851 464 ProSiteProfiles Response regulatory domain profile. 14 131 IPR001789 GO:0000160
Acco03g0851 464 CDD REC 16 114 - -
Acco03g0851 464 MobiDBLite consensus disorder prediction 215 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0851 Acco-ChrAcco03 16771939 16774151 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0851 142 205 Response Regulator Gene Family AT2G01760 45.312 4.23e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco03g0851 None None None