Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0807 ATGAGCTCCAAATCGAGGCGTCAACGACGAAGCTTTGACTGGCGATCGGTTTCTTCGGCAAATGCCGAACCTACTCACTTCATGAAGATCATACTTTGGGGAAACATTCATGCCCAAAACATTAGAATTCCAAGGGAGTTTGTGAGAAGATTCGAGAATGAACTGTGTAGTACTAGTGAGACAGCCATTACTGTTCCAGATGGTCGTGTTTGGAAGATGGAATTGAAGAAATGTCAAGACGAAGAAGTTTGGTTGTGCAAGGGTTGGGAAGAATTTATGAAGTACTACTCGATTAGGTTTGGCTTCATTTTAGCCTTCAAATATGAAGGCAACTCACAATTCAGTGTGATCGTCGTTGATGCGAGTGCTGCTGAGATTTACTATCCACGCAAAGTGAACAACCCTGAGAAGCAGAAACTGGCACCTGAACGACGTAGAAAAAGGCCATACAAGTTCGATCATTGTGGCTACAACACAAGGAGCCGAAGGCATAAGCTGGATGAAGAAAAAGAAGAAGAGATAATTGACATAGACGCAGGCGAAGATAATGCTTTATCAAGCCATGGTATATCAGGAAACAAAGATAGATCTGGGCAAAGAGCTATGGAAGCTAACCAGAATTTGGAATCAGAAAATCCTCCATACTTTACTACAACAATAAGGGCAGCTCATCTGAATCGTCGTTATATTGATGTGCCAGCTTCATTCTGGAAGGTTTATCTGTGCAAGAATGGTCCTATGAAGTTGCAGGATTGTAAAGGACGAACATGGAAGGTGAATTATACTAAATACACGTCAACTCTTCGAATACACAAGGCTTGGATCGGTTTCATGAGGGCTAACAATGTGAAGGAAGGAGACAAGTGTGTGTTTGAGCTTATCAAGAGGAATAACCAGTTTGTATTTCAAGTTACCATAAACTGA 924 0.4167 MSSKSRRQRRSFDWRSVSSANAEPTHFMKIILWGNIHAQNIRIPREFVRRFENELCSTSETAITVPDGRVWKMELKKCQDEEVWLCKGWEEFMKYYSIRFGFILAFKYEGNSQFSVIVVDASAAEIYYPRKVNNPEKQKLAPERRRKRPYKFDHCGYNTRSRRHKLDEEKEEEIIDIDAGEDNALSSHGISGNKDRSGQRAMEANQNLESENPPYFTTTIRAAHLNRRYIDVPASFWKVYLCKNGPMKLQDCKGRTWKVNYTKYTSTLRIHKAWIGFMRANNVKEGDKCVFELIKRNNQFVFQVTIN 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0807 307 SUPERFAMILY DNA-binding pseudobarrel domain 21 122 IPR015300 -
Acco03g0807 307 Gene3D - 194 307 IPR015300 -
Acco03g0807 307 Pfam B3 DNA binding domain 216 304 IPR003340 GO:0003677
Acco03g0807 307 Pfam B3 DNA binding domain 38 118 IPR003340 GO:0003677
Acco03g0807 307 ProSiteProfiles B3 DNA-binding domain profile. 215 307 IPR003340 GO:0003677
Acco03g0807 307 ProSiteProfiles B3 DNA-binding domain profile. 26 122 IPR003340 GO:0003677
Acco03g0807 307 SUPERFAMILY DNA-binding pseudobarrel domain 211 304 IPR015300 -
Acco03g0807 307 PANTHER B3 DOMAIN-CONTAINING 21 302 - -
Acco03g0807 307 CDD B3_DNA 26 120 IPR003340 GO:0003677
Acco03g0807 307 SMART B3_2 27 122 IPR003340 GO:0003677
Acco03g0807 307 SMART B3_2 216 306 IPR003340 GO:0003677
Acco03g0807 307 Gene3D - 18 123 IPR015300 -
Acco03g0807 307 CDD B3_DNA 214 304 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0807 Acco-ChrAcco03 14515143 14516740 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0807 199 305 B3 DNA Binding Superfamily AT3G18990 33.945 3.50e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Acco03g0807 B3 1.2e-12 CL0405