Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0800 ATGTTCGCCGGAGATATTTCCCGGCAATGTCACCCGCCGGTGATCTTGTTTTCTCTGTTTTTTCTCTTCCTGGCTGTTTCGTCCCTGTCGGATGAGTTTCAAATGCTCATGAAGTTCAAGTCCTCTGTTCAAATTTCAAACGCCGATGATGTTTTCGGTTCATGGACGGAAGCCAATTCTCCCTGCAATTTCGCCGGAATTCTCTGCAATTCCAATGGTTTCGTCTCAGAAATCAACCTCGCCGGAAGAAATCTTGGGGGTACTATTCGGTTTGATTCACTTTGTGGGCTTCAGTCGTTAGAGAAATTATCTCTGGGGTCGAATTCCTTCCATGGAAGAATCAGCGAGGACCTGAGGAAGTGCAGTAATTTGAAGTATCTGGATTTGGGCGGGAATTTGTTTTCTGGGGAAATGCCTGAGTTCTCTAATTTGATCAAGCTTACCTACTTGAACTTGAATGCCAGCGGAATTTCTGGGACATTTCCATGGAAATCATTGGGAAATCTAACTAGTCTTGGATTTTTAAGCCTTGGAGATAACACGTTTGAAAAAAGTCCTTTTCCTTTGGAGGTGTTAAAGCTTGAAAAATTGTATTGGCTTTACCTCACGAATTGCAGCATCACTGGGAAAATCCCATTGGGTATTGGGAATCTAACTCAGCTTGAGGATCTTGAACTTTCTGATAACCTTTTGACAGGTGAAATCCCGGGTGATATTGCGAAGCTTCAGAAGCTGAGCCAACTTGAGATATATGATAACTATTTGATTGGGAAAATCCCAAAAGGATTTGGTAATCTCACAAATCTTGTCTACTTGGATGTTTCTAATAATCAACTTGAAGGTGATATTTCTGAGCTTCGGTTCTTGACAAACTTAGCTTCTCTTCAGCTTTTTCAGAACCAATTCTCTGGAGGAATCCCAAATGAGTTCGGAGATTTCAAAAGCCTTGCTGAGTTTTCACTTTATGCAAATAATTTCACTGGTCCTCTCCCTCAAAAGCTTGGCTCCTGGGTTGGTTTACAATATATTGATGTTTCTGATAACTCTCTGTCTGGTCCTATACCACCTGACATGTGCAGGAACAACAACATGACTGAGCTAGCTGTGTTGAACAATAGCTTCACTGGAAGTATACCTGAAACATATGCGAATTGTTCGGCTATGGTTCGTTTTCGCGTTAACAGAAACTCGCTTTCTGGTCGTGTTCCTTCGGGTTTATGGGGCCTGCCAAATATGAAAATAATTGATCTTTCAATGAACCAGTTTGAAGGTCCAGTGGCATCTGATATTGCTGACGCAAAGTCTCTTGCACTACTATTTTTAACGGACAACAAGTTCTCTGGTGAACTACCCTCAGGAATCTCAGAAGCTTCTTCATTGGTATCAATCAAGTTGAGCTCAAATCAATTCTCTGGTAAGCTTCCAGATTCTATAGGAAACTTGAAGAAATTGGGTAGTCTTAAGTTGGATGGAAACAATTTTTCTGGTTCTATACCAGAGTCTTTAAGTTCTTGTATTTCTCTCAATGAAGTAAACATTGCTGGGAACTCGCTTTCTGGGGAGATCCCTGCGAGTGTTGGCTCTCTGCCTACTCTCAATTCATTAAACCTATCGTCCAATAGACTTTCGGGCCAAATTCCATCGAGCTTGTCGTCTCTTAAATTGAGCCTTCTTGATTTATCAAACAACAATTTCTTTGGTCCAGTGCCAGATTCACTCTCTATTCCGGCATTCATAGATGGGTTAAAGGGAAATCCTGGCTTATGCAGTGAGACTTTGGAAAATTTCAGGCCATGTTCACTGGTTAGCACTGGCTCTAGTCGAGTTAGGACCATTATTCTCTGTTTGCTTGCTGGTATAATGGTTCTGCTAGTTTCATTGGCATGCATATTCTTCCTGAAACTAAAGCAGAACAAGTTAGAGGAGAATCCTTTGAAGACTAATTCCTGGGATTTGAAGCAGTACCATGTGATAAACTTCAACGAAAATGAAATCATTGAAGGTATCAAGTCTGATAATGTGATTGGCAAAGGAGGATCCGGGAATGTTTACAAGGTTGTTCTCAAATGCGGCAAAGAATTGGCAGTCAAGCACATATGGACTTTGAATCCGGGTGAACCAGGAAGTGGCCGGAGCAGTTCAGTGATGCTGAAAAGAAGTTGCCGGTCACCAGAGTATGATGCTGAGGTGACCACACTTAGCTCCATAAGGCATGTGAATGTAGTGAAGCTCTACTGTAGCATCACAAGTGAAGATAGTAGCCTTCTAGTTTACGAGTTTTTGCCGAATGGGAGCTTGTGGGATAAGCTGCACAATTGCCAGAAAAGTCCTATGAGTTGGGAGGTTAGGTATGAGATTGCTTTGGGAGCAGCTAGAGGATTGGAGTATCTGCATCATGGGTGTGATAGGCCAGTTATACATAGAGATGTGAAATCAAGTAACATTTTGATTGATAAAGAATGGAAGCCAAGGATTGCTGACTTTGGGCTTGCCAAGATTGTGCAGAGAGGAGCAGGCAATTGGACAAATGTTATTGCTGGAACACTTGGTTACATGGCTCCTGAGTATGCCTATACATGTAAGGTGACTGAGAAGAGTGATGTGTATAGCTTTGGAGTGGTTCTAATGGAGTTAGTGACGGGGAAGAAGCCGAATGAATCAGAATTTGGGGAGAGCAAGGACATAGTCAACTGGGTATGCGGCAACAAGAGGACCACCAAAGAAGACATGGTTGAGCTTGTGGATTCCACAATTCCAAAGCATTACAGAGATGATGCCATGAAGGTTCTGAGAATTGCAACACTCTGCACTGTGAAGGTTCCATACTCAAGACCTTCCATGAGAATGGTGGTTCAAATGCTGGAAGAGGCAGCACCTTGTACTCTGACCGATGTTGTTGTGGCTAAAGATGGTTAA 2916 0.4242 MFAGDISRQCHPPVILFSLFFLFLAVSSLSDEFQMLMKFKSSVQISNADDVFGSWTEANSPCNFAGILCNSNGFVSEINLAGRNLGGTIRFDSLCGLQSLEKLSLGSNSFHGRISEDLRKCSNLKYLDLGGNLFSGEMPEFSNLIKLTYLNLNASGISGTFPWKSLGNLTSLGFLSLGDNTFEKSPFPLEVLKLEKLYWLYLTNCSITGKIPLGIGNLTQLEDLELSDNLLTGEIPGDIAKLQKLSQLEIYDNYLIGKIPKGFGNLTNLVYLDVSNNQLEGDISELRFLTNLASLQLFQNQFSGGIPNEFGDFKSLAEFSLYANNFTGPLPQKLGSWVGLQYIDVSDNSLSGPIPPDMCRNNNMTELAVLNNSFTGSIPETYANCSAMVRFRVNRNSLSGRVPSGLWGLPNMKIIDLSMNQFEGPVASDIADAKSLALLFLTDNKFSGELPSGISEASSLVSIKLSSNQFSGKLPDSIGNLKKLGSLKLDGNNFSGSIPESLSSCISLNEVNIAGNSLSGEIPASVGSLPTLNSLNLSSNRLSGQIPSSLSSLKLSLLDLSNNNFFGPVPDSLSIPAFIDGLKGNPGLCSETLENFRPCSLVSTGSSRVRTIILCLLAGIMVLLVSLACIFFLKLKQNKLEENPLKTNSWDLKQYHVINFNENEIIEGIKSDNVIGKGGSGNVYKVVLKCGKELAVKHIWTLNPGEPGSGRSSSVMLKRSCRSPEYDAEVTTLSSIRHVNVVKLYCSITSEDSSLLVYEFLPNGSLWDKLHNCQKSPMSWEVRYEIALGAARGLEYLHHGCDRPVIHRDVKSSNILIDKEWKPRIADFGLAKIVQRGAGNWTNVIAGTLGYMAPEYAYTCKVTEKSDVYSFGVVLMELVTGKKPNESEFGESKDIVNWVCGNKRTTKEDMVELVDSTIPKHYRDDAMKVLRIATLCTVKVPYSRPSMRMVVQMLEEAAPCTLTDVVVAKDG 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0800 971 Gene3D Ribonuclease Inhibitor 287 604 IPR032675 -
Acco03g0800 971 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Acco03g0800 971 FunFam Serine/threonine-protein kinase-like protein CCR4 761 966 - -
Acco03g0800 971 Pfam Protein kinase domain 671 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0800 971 SUPERFAMILY Protein kinase-like (PK-like) 661 955 IPR011009 -
Acco03g0800 971 FunFam Leucine-rich repeat receptor-like protein kinase TDR 286 601 - -
Acco03g0800 971 Gene3D Phosphorylase Kinase; domain 1 653 760 - -
Acco03g0800 971 FunFam Leucine-rich receptor-like protein kinase family protein 189 285 - -
Acco03g0800 971 SUPERFAMILY RNI-like 77 425 - -
Acco03g0800 971 ProSitePatterns Protein kinases ATP-binding region signature. 675 697 IPR017441 GO:0005524
Acco03g0800 971 Gene3D Transferase(Phosphotransferase) domain 1 761 964 - -
Acco03g0800 971 ProSiteProfiles Protein kinase domain profile. 669 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0800 971 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Acco03g0800 971 FunFam Receptor-like protein kinase HAIKU2 652 760 - -
Acco03g0800 971 CDD STKc_IRAK 675 956 - -
Acco03g0800 971 Gene3D Ribonuclease Inhibitor 31 186 IPR032675 -
Acco03g0800 971 Gene3D Ribonuclease Inhibitor 187 286 IPR032675 -
Acco03g0800 971 FunFam Probable inactive receptor kinase RLK902 29 188 - -
Acco03g0800 971 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 363 957 - -
Acco03g0800 971 SUPERFAMILY RNI-like 322 642 - -
Acco03g0800 971 SMART serkin_6 669 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0800 971 ProSiteProfiles Leucine-rich repeat profile. 268 290 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0800 Acco-ChrAcco03 14277195 14280606 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0800 17 970 Receptor kinase-like Gene Family AT1G09970 58.524 0.0 1064
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco03g0800 Pkinase 6.7e-44 CL0016