Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0781 ATGTCCAGCCTCGTTGCACAATGCCGTTTCTGTGTCTGTGGTAGACTTTCTACTCCTGATGCCTTTGAAAGTGCATCTCCTGAGCGTAATTACCACCAAATCACAAAGCGAAATTTCGTCCTCAAGATTTGTATGGGTTTCGTACAACATGTTCCTGATCATGATCTTCCTTTTATCGGCGTTGCTTGCCAAGTTTCTTCTCATTACATCTCAATCAAAGAGTTCTTCAAGAACGGTTCGAGTTTCTTAAGAAGAAACCTTTCTCATCATTTGCTCCCAACTGAGAATCTTGATATGCTGATACCCGACCTCCTCTGTGACGCTCGAAAATGGCACAATAATCATCCTTGTCGTCGGCCTTCTCGCTCCAAAGATGGTTTTGTCGTGATACCTTTGGTTATTGAGATCCTCGTTGTGTTGAATGAGAATGTCAACCTCGAAGATGTTGGGGATGATGCAGAGCAGGAGATACGGATGATTCCTACTAGTGAGGAAGTCATTCGATCGCTCGACAAAATAGAACTTCGAGGAGATGAAGATGCTGATTCAAATAAGAAGGATGCGTGTTGCATTTGCTTTGAAGATTTCTCTGACGCAGCAGAGGATTCAACAATGCCGTGTCATCATTCTTTTCACCATAACTTTATAGATCAATGGCTAAAAACTAGCCATCTATGTCCTTTTCTTTTCACCATAACTTTATAG 705 0.4199 MSSLVAQCRFCVCGRLSTPDAFESASPERNYHQITKRNFVLKICMGFVQHVPDHDLPFIGVACQVSSHYISIKEFFKNGSSFLRRNLSHHLLPTENLDMLIPDLLCDARKWHNNHPCRRPSRSKDGFVVIPLVIEILVVLNENVNLEDVGDDAEQEIRMIPTSEEVIRSLDKIELRGDEDADSNKKDACCICFEDFSDAAEDSTMPCHHSFHHNFIDQWLKTSHLCPFLFTITL 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0781 234 ProSiteProfiles Zinc finger RING-type profile. 189 227 IPR001841 -
Acco03g0781 234 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 98 227 - -
Acco03g0781 234 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 148 229 IPR013083 -
Acco03g0781 234 SUPERFAMILY RING/U-box 188 227 - -
Acco03g0781 234 Pfam Ring finger domain 188 228 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0781 Acco-ChrAcco03 13759081 13759785 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0781 158 228 C3H Transcription Factor Family AT1G68070 36.620 9.47e-08 50.1