Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0778 ATGGGTTTCTTACAACATGTTCCTGATCATGATCTTCCTTTCATCGGTGTTGCTTGGCAAGTTTCTTCTCATTACATCGCAATCAAGGAGTTCTTCAAGAACGGTTCGAGTTTCTTAAGAAGAAACCTCTCTCATCATTTGCTCCCAACTGAGAATCTTGATATGCTGATACCCGACCTCCTCTGTGACGCTCGAAAATGGCACAATAATCATCCTTGCCGTCGGCCTTCTCGCTCCAAAGATGGTTTTGTCGCGATGCCTTTGGTTATTGAGATCCTCGTCGTGTTGAATGAGAATGTCAACCTCAAAGATGTTGGGGATGATGCAGAGCAGGAGATACGGATGATTCCTACTAGTGAGGAAGTCATTCGATCGCTCGAGAAAATAGAGCTTCGAGGAGATGAAGATGCTGATTCAAATAAGAAGGATGCGTGTTGTATTTGTCTTGAAGACTTCTCTAACGGCGCAGAGGTTTCAACAATGCCGTGTCATCATTCTTTTCACCATAATTGTATGGCTAAAAACTAG 528 0.4337 MGFLQHVPDHDLPFIGVAWQVSSHYIAIKEFFKNGSSFLRRNLSHHLLPTENLDMLIPDLLCDARKWHNNHPCRRPSRSKDGFVAMPLVIEILVVLNENVNLKDVGDDAEQEIRMIPTSEEVIRSLEKIELRGDEDADSNKKDACCICLEDFSNGAEVSTMPCHHSFHHNCMAKN 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0778 175 Pfam RING-like zinc finger 145 171 IPR001841 -
Acco03g0778 175 ProSiteProfiles Zinc finger RING-type profile. 145 172 IPR001841 -
Acco03g0778 175 PANTHER TARGET OF ERK KINASE MPK-1 43 173 - -
Acco03g0778 175 CDD RING-H2 145 174 - -
Acco03g0778 175 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 175 IPR013083 -
Acco03g0778 175 SUPERFAMILY RING/U-box 144 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0778 Acco-ChrAcco03 13713892 13714419 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0778 135 174 C3H Transcription Factor Family AT1G68070 47.500 7.49e-07 46.2