Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0745 ATGGAGAAAGCTGCGCAAGAGAATGGACATTCAATGATCATTCCTACCATCTCTCAGTCCAATAGGGTGAATGACGCAGAGATGGCTAATGTCATTGCTCACTATTTGGACAGTATATCTCACATAAGAGATCATTTCTTAGGTTATCCAACCAATCTAGACTTCAACTACGATGCATTGGTGCAGTTGCTACGTTTCCACTTGAACAATGTTGGTGATCCATTTATGGGCAGCAGTTTTTCGCTTAACTCTAATCCATTTGAGCTGTGCGTGCTTGATTGGTTTGCCAAATTATGGCAAATAGAGAAGAATGAATACTGGGGATACGTTACCAGTGGTGGAACTGAAGGAAATTTCAACGGCATTTTAGTAGGGAGGGAACTGTATCCTGACGGAATTATTTACACATCACGGGACTCCCATTATTCAGTGTTGAAAGCAGCAAGACTTCTAAGAGTCACATGTGTGGTTGTTGGGACTCTAATTTCAGGTGAGATTGACTATGATGAACTCAAGGAGTCACTTCTTGCAAACAAGGACAAACCAGCCATAATCAACCTAAACATAGGGACTACTCTAAAGGGAGCCATTGATGATGTTGATCTTGTACTACAATCACTTGAGGATTGTGGTTTCACTCGAGATCGATTCTACATTCATTGTGACGCCGCACTATTTGGAATGATGGTACCTTTTGACGTTGGAGCACCGGATATTTCTTTCAAGAAACCTATCGGAAGCGTAACTATTTCAGGCCACAAGTTCCTAGGCTGTCCAATACCTTGTGGAATTCTTATAACTCGTTTGAAATACATTGATTTTCTCTCAAGTGAAGTAGAATACATTACTTCAAGAGACACCACCATCATAGGAAGTCGAGGTGGCCACGCCCCCATCTTCATTTGGTACGCTCTCAACAAGAAAGGCTTCAATGGCCTTCAAGAAGAAGTCCAAGAGTGCGTCAAGAAGGCGGTCTACCTCCAAGATCGCTTGAGAGATCACGGCATTGGAGCTTTTCTAAACAAGTTTAGTAACATTGTGGTGTTCGAGAGGCCTCAAGATGATGAGTTTGCTCGTAAGTGGAGCTTAGCTAATAAAGGGAATATATCGCATGTGGTGGTGATGAAACATGTGTCGTTAGAAATGTTAGACTCATTTGTAAATGAGTTTGTGAAGAGACGGCGTGCTTGGTACGAAGGTAATAGTACTAGGCAAATTCAGCCTCCATGCGTCGCTGAGGATATTGGTGCTGAGAATTGTGCTTGTGCTTTTCACAAGATATTGATTTCATAA 1293 0.4207 MEKAAQENGHSMIIPTISQSNRVNDAEMANVIAHYLDSISHIRDHFLGYPTNLDFNYDALVQLLRFHLNNVGDPFMGSSFSLNSNPFELCVLDWFAKLWQIEKNEYWGYVTSGGTEGNFNGILVGRELYPDGIIYTSRDSHYSVLKAARLLRVTCVVVGTLISGEIDYDELKESLLANKDKPAIINLNIGTTLKGAIDDVDLVLQSLEDCGFTRDRFYIHCDAALFGMMVPFDVGAPDISFKKPIGSVTISGHKFLGCPIPCGILITRLKYIDFLSSEVEYITSRDTTIIGSRGGHAPIFIWYALNKKGFNGLQEEVQECVKKAVYLQDRLRDHGIGAFLNKFSNIVVFERPQDDEFARKWSLANKGNISHVVVMKHVSLEMLDSFVNEFVKRRRAWYEGNSTRQIQPPCVAEDIGAENCACAFHKILIS 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0745 430 Pfam Pyridoxal-dependent decarboxylase conserved domain 132 334 IPR002129 GO:0016830|GO:0019752|GO:0030170
Acco03g0745 430 Gene3D Aspartate Aminotransferase, domain 1 299 394 IPR015422 GO:0003824
Acco03g0745 430 SUPERFAMILY PLP-dependent transferases 39 395 IPR015424 -
Acco03g0745 430 PANTHER - 21 426 - -
Acco03g0745 430 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 247 268 IPR021115 GO:0016831
Acco03g0745 430 Gene3D - 79 293 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0745 Acco-ChrAcco03 12881545 12885471 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0745 189 329 Calmodulin-binding Proteins AT1G65960 25.478 1.57e-07 51.2