Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0726 ATGGCAGCAAGACAAGACAGTAACAATCCTCCTCCTCATCTTCTTCCTTCTTTAGAACTCATTACCATCATAACACTGTTATTCTTTCTCATATACCCTTCTGATGTTTCTTCAATTTCCTTCAACTATGAAGGATTCAAAAAGAATGATCCAACCTTAAGACTTCAAGGAGATGCAGACTATGACGAAAATGGATGCCTGAACCTCACAAAGTTAGAGAAAGACAGCATTGGGAGAGTCACCTACTCCGAAAATCTCCATCTTTGGGATGAGAAGACAGGAAAAGTCACAAATTTTTCTACCCGTTTCTCCTTCATCATCAATACACAAGGAAAGAGCTTCCATCTTGGAGATGGCATCACCTTCTTCCTTGCTGCACCAGGCTTTCCCCTTTCTGATAAAGACGGCGCTGGAATTGGCCTTGTGAGTCGTCATCAATGGATGGATCCAAACTACAGAAAGCAGCATCCTTTTGTGGCTGTGGAGTTTGACACCTTCCCAAACAATGATTTGGATCCTCACTATGATCATGTGGGGATTGATATTAATTCTTTAAGCACAAAGTATACTACACAGTGGTTCAATGTTAAGGATGGGAGAAGATATGATGCAGAGATCAATTATGATACCAGTTCTTTCAATTTGAGTGTAAATTTTATTGGATATAAGAATGGCTCTAGAATTGAACAGAATTTCTTTCATATTGTAAATTTGGCTTCTGTTCTTCCAGAGTGGGTTGAGTTAGGATTTTCTTCTGCAACAGGTCTTTTATATGATGAGATCCATACTCTTTGCTCTTGGTCCTTCAGTCCAAGTTTAGATGTGGAAGATCAGATAAATCAAACCAAGAAAGGACTAATAGAAACATTGAGCATAGGAGGAGGTGTTTTAGCATGTGGAATAGGGTTAATTTGGTTTATGATTTGGAATATCAAAAGAAGAAGAGGAAGAGGAAGAAGCAATGGTGGTTTTGGCTTTGAGCTAATAAGCATGGAACATGAGTTTCAGAGAATCATAGGGCCTAATAAGTTTCCATATAAGCAGCTTGTTAAAGCAACCGAAAACTTTACACAAGAGAATAAGCTTGGAGAGGGAGGATTTGGTGGAGTTTACAAAGGCTTCATAGAAGAATTGAATAGCTTTGTTGCTATTAAGAAGATATCACAAGGATCTAAGCAAGGAGTGAAGGAGTATGCATCAGAGGTCAAGATCATCAGTCAACTAAGGCATAAGAATCTGGTTCGACTAATCGGGTGGTGTCATGAGCACAATGAACTGATGCTAGTTTACGAGTTCATGCAAAATGGAAGCTTAGATTCTCATCTCTTCAAAGGGAGAAGTCTCTTAACATGGGAACAAAGATATAACATCGCTCGAGGCATAGCCTTAGCATTATATTACCTCCATGAAGAGTGCGAACAATGTGTAGTTCATAGGGACATAAAAGCAAGCAACGTTATGTTAGATCCAAACTTCAATGCAAAACTTGGAGATTTTGGATTGGCTAGACAAGTGGACCATGCAAAAGGGTCTAAAACAACAGATCTAGCAGGAACATTTGGATATATGGCTCCGGAATACATCTCAAAAGGAAAGGCCAGCAGAGAGACAGATGTGTACAGTTTCGGAGTGGTAGCTTTGGAAATAGCTTGTGGGAGAAAAGCAATCAAATTCAGTGCTAATGAAGAACAGGTCTTACTTGTGGATTGGATTTGGGAACTCCATCAGAGAAAAAGTGTTCTTGAAGCAGCTGATGAGAGATTGTGTGGAGACTTCAATGAGCAGGAAATGTTGAGGTTGATGATGGTGGGATTGTGGTGTGTTCATCCTGATTCTATTCTAAGGCCTCCTATAAGACAAGTAGTTCAAGTGCTTAATTTTGAAGCTCCTTTACCTAATCCGCCATCACAGAAGCCTGCAATTGCAAATGGTTCTGTCAGAATCAGTGAATTTACATCTTCAAGCTCTTCATCAAGTACTAGTGCTTCTAGGATCAATCACACATTACCTTTAAGTGATGGCTGCTTCACTGGCTCATCACAATCAAGCATTTCTCCCGTTGATCCCATTCTGCACACATATTAA 2085 0.3971 MAARQDSNNPPPHLLPSLELITIITLLFFLIYPSDVSSISFNYEGFKKNDPTLRLQGDADYDENGCLNLTKLEKDSIGRVTYSENLHLWDEKTGKVTNFSTRFSFIINTQGKSFHLGDGITFFLAAPGFPLSDKDGAGIGLVSRHQWMDPNYRKQHPFVAVEFDTFPNNDLDPHYDHVGIDINSLSTKYTTQWFNVKDGRRYDAEINYDTSSFNLSVNFIGYKNGSRIEQNFFHIVNLASVLPEWVELGFSSATGLLYDEIHTLCSWSFSPSLDVEDQINQTKKGLIETLSIGGGVLACGIGLIWFMIWNIKRRRGRGRSNGGFGFELISMEHEFQRIIGPNKFPYKQLVKATENFTQENKLGEGGFGGVYKGFIEELNSFVAIKKISQGSKQGVKEYASEVKIISQLRHKNLVRLIGWCHEHNELMLVYEFMQNGSLDSHLFKGRSLLTWEQRYNIARGIALALYYLHEECEQCVVHRDIKASNVMLDPNFNAKLGDFGLARQVDHAKGSKTTDLAGTFGYMAPEYISKGKASRETDVYSFGVVALEIACGRKAIKFSANEEQVLLVDWIWELHQRKSVLEAADERLCGDFNEQEMLRLMMVGLWCVHPDSILRPPIRQVVQVLNFEAPLPNPPSQKPAIANGSVRISEFTSSSSSSSTSASRINHTLPLSDGCFTGSSQSSISPVDPILHTY 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0726 694 ProSiteProfiles Protein kinase domain profile. 356 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0726 694 Gene3D Phosphorylase Kinase; domain 1 341 432 - -
Acco03g0726 694 ProSitePatterns Protein kinases ATP-binding region signature. 362 386 IPR017441 GO:0005524
Acco03g0726 694 SMART serkin_6 356 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0726 694 SUPERFAMILY Concanavalin A-like lectins/glucanases 37 273 IPR013320 -
Acco03g0726 694 CDD STKc_IRAK 362 626 - -
Acco03g0726 694 FunFam L-type lectin-domain containing receptor kinase IX.1 341 432 - -
Acco03g0726 694 SUPERFAMILY Protein kinase-like (PK-like) 332 627 IPR011009 -
Acco03g0726 694 Pfam Protein kinase domain 356 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0726 694 Gene3D - 36 276 - -
Acco03g0726 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Acco03g0726 694 CDD lectin_legume_LecRK_Arcelin_ConA 39 270 IPR001220 GO:0030246
Acco03g0726 694 ProSitePatterns Legume lectins alpha-chain signature. 242 251 IPR000985 -
Acco03g0726 694 PANTHER - 59 634 - -
Acco03g0726 694 Pfam Legume lectin domain 39 283 IPR001220 GO:0030246
Acco03g0726 694 FunFam Lectin-domain containing receptor kinase A4.3 433 643 - -
Acco03g0726 694 Gene3D Transferase(Phosphotransferase) domain 1 433 646 - -
Acco03g0726 694 ProSitePatterns Legume lectins beta-chain signature. 159 165 IPR019825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0726 Acco-ChrAcco03 12130534 12132618 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0726 22 640 Receptor kinase-like Gene Family AT5G10530 45.755 1.29e-167 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Acco03g0726 Pkinase 1.8e-52 CL0016