Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0693 ATGTTGATTGTTTTAGCTATTGTGGTTCTAAAGAATAACAGAGATGATGATAAAAATTCAACAAAGGGGGATTTAATAACTTTGGATACCCCGGTCAGGATATCCTATTTTGAGCTTCTACGGGGAACAAATGGATTTGATGAGAGTAATCTTGTTGGTTCTGGAAGCTTTGGATCAATATATAAAGCAATTCTTCCAAGTAAAAAGACAATTGCTGTCAAAGTGTTTAACTTAGAGATTGAAGAAGCATCAAGAAGTTTTGATGTTGAATGTTCTACCATGTGTCATTTACGCCACCACAATCTCATTAAGATCATCAGTAGTTGCTCAAATGGTCATTTCAAATCTCTAATAATGGAATTCATGGTAAATGGGAGTCTTGATAGATGGCTATACTCTGATAACTATTATTTAAATGTCTTGCAAAGGTTGAACATAATGATTGATGTGGCAGCTGCTTTGGAGTATCTTCACCATGGTTCTTCTACACTAGTTGTTCATTGTGATGTGAAACCAAGCAATGTTTTGTTGGATGAAGATATGGTGGCTCATCTTAGTGATTTTGGTATTGCTAAATTGTTTGGTGAAAAGCAAGTGGAAATTTATACCAAAACCTTGGCAACAATTGGCTACATAGCACCAGCAAATATTTGTCATCTTCATTTTGGATCGAAAGGAGTTGTTTCCACCAAAGGAGATGTGTACAGTTATGGGATTTTGCTAATGGAAATATTTACAAGGAAGAAGCCAACGGATGAAATGTTTGTTCAAGGACTAAGTTTGAAAGATTGGGTGAGCAACTCCACACCACATTCCATCATGAATATTATAGATGTCAATTTGCTACATATAGAAAATCAAAATACTAATAATATACTACCTTATATGTCATCAATTTTTGAGTTAGCATTACATTGTTCCACTGAATTACCAGAGGCAAGACTTACTATGATTGATGTTGTAGCATCATTGAGAAAAATCAAGTCTTTGTTTATGGAAAATGATTGA 1008 0.3433 MLIVLAIVVLKNNRDDDKNSTKGDLITLDTPVRISYFELLRGTNGFDESNLVGSGSFGSIYKAILPSKKTIAVKVFNLEIEEASRSFDVECSTMCHLRHHNLIKIISSCSNGHFKSLIMEFMVNGSLDRWLYSDNYYLNVLQRLNIMIDVAAALEYLHHGSSTLVVHCDVKPSNVLLDEDMVAHLSDFGIAKLFGEKQVEIYTKTLATIGYIAPANICHLHFGSKGVVSTKGDVYSYGILLMEIFTRKKPTDEMFVQGLSLKDWVSNSTPHSIMNIIDVNLLHIENQNTNNILPYMSSIFELALHCSTELPEARLTMIDVVASLRKIKSLFMEND 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0693 335 SUPERFAMILY Protein kinase-like (PK-like) 22 324 IPR011009 -
Acco03g0693 335 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Acco03g0693 335 Gene3D Transferase(Phosphotransferase) domain 1 122 334 - -
Acco03g0693 335 Coils Coil 335 335 - -
Acco03g0693 335 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 122 335 - -
Acco03g0693 335 Pfam Protein kinase domain 47 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0693 335 SMART serkin_6 46 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0693 335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Acco03g0693 335 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 329 - -
Acco03g0693 335 ProSiteProfiles Protein kinase domain profile. 46 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0693 335 Gene3D Phosphorylase Kinase; domain 1 7 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0693 Acco-ChrAcco03 11095860 11097063 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0693 33 333 Receptor kinase-like Gene Family AT3G47570 42.368 1.08e-76 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Acco03g0693 Pkinase 3.1e-42 CL0016