Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0689 ATGCTAATGATAAAATGCTTATTGCCTACCATTGTTGCCATGTTGATTGTTTTAGCCATTGTGATTCTAAAGAATAAGAGAGATGATAATAAAAATTCAATGAAAAGGGATTTAATAACTTGGGATACCCCAATCAGGATATCCTATTTTGAGCTTCTACGGGGAACAAATGGATTTGATGAGAGTTATCTTGTTGGTTCTGGAAGCTTTGGATCAGTATACAAAGCAATTCTTCCAAGTAAAAAGACAGTTGCTGTCAAAGTGTTTAACTTAGAGATTGAAGAAGCATCAAGAAGTTTTGATGTTGAATGTTCTGCCATGTGCCATTTACGCCACCGCAATCTCATTAAGATCATCAGTAGTTGCTCAAACGATCATTTCAAATCTCTAATAATGGAATTCATGGTAAATGGGAGTCTTGACATATGGCTATACTCTCATAACTATTATTTAAATGTCTTGCAAAGGTTGAACATAATGATTGATGTGGCGGCTGCTTTGGAGTATCTTCACCATGGTTCTTCTACTCTAGTTGTTCATTGTGATGTGAAACCAAGCAATATTTTGTTGGATGAAGATATGGTGGCTCATCTTAGTGATTTTGGTATTGCTAAATTGTTTGGTGAAAAGCAGTTGCAAATTTATACCGAAACTTTGGCAACAATTGGCTATATAGCACCAGAGTTTGCATCGAAAGGAATTGTTTCCACCAAAGGAGATGTGTATAGTTATGGGATTTTACTAATGGAGATATTTACAAGGAAGAAGCCAACGGATGAAATGTTTGTTCAAGGACTAAGTTTGAAAGATTGGGTTAGCAACTCCACACCACATTCCATCATGAATATTATAGATGTCAATTTGCTACAAAGAGAAAATCAAAATACTAATAGTATACTACCTTATATGTCATCAGTTTTTGAGTTAGCATTACATTGCTCCACTGAATTACCAGAGACACGACTTACTATGATTGATGTTGTAGCATCATTGAGAAAAATCAAGTCTTTGTTTATGGAAAATGCTTGA 1029 0.3489 MLMIKCLLPTIVAMLIVLAIVILKNKRDDNKNSMKRDLITWDTPIRISYFELLRGTNGFDESYLVGSGSFGSVYKAILPSKKTVAVKVFNLEIEEASRSFDVECSAMCHLRHRNLIKIISSCSNDHFKSLIMEFMVNGSLDIWLYSHNYYLNVLQRLNIMIDVAAALEYLHHGSSTLVVHCDVKPSNILLDEDMVAHLSDFGIAKLFGEKQLQIYTETLATIGYIAPEFASKGIVSTKGDVYSYGILLMEIFTRKKPTDEMFVQGLSLKDWVSNSTPHSIMNIIDVNLLQRENQNTNSILPYMSSVFELALHCSTELPETRLTMIDVVASLRKIKSLFMENA 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0689 342 SMART serkin_6 59 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0689 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Acco03g0689 342 SUPERFAMILY Protein kinase-like (PK-like) 33 331 IPR011009 -
Acco03g0689 342 Pfam Protein kinase domain 62 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0689 342 FunFam Serine-threonine protein kinase plant-type 40 134 - -
Acco03g0689 342 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 336 - -
Acco03g0689 342 Gene3D Transferase(Phosphotransferase) domain 1 135 341 - -
Acco03g0689 342 ProSitePatterns Protein kinases ATP-binding region signature. 65 87 IPR017441 GO:0005524
Acco03g0689 342 ProSiteProfiles Protein kinase domain profile. 59 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0689 342 Gene3D Phosphorylase Kinase; domain 1 20 134 - -
Acco03g0689 342 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 135 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0689 Acco-ChrAcco03 10962150 10963389 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0689 46 340 Receptor kinase-like Gene Family AT3G47570 43.492 1.01e-77 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Acco03g0689 Pkinase 3.7e-45 CL0016