Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0684 ATGGAGTCCCTGGATCTTTCCCACAATTATTTGTCTGGCGTGATTCCAAAGCCCTTAGAGTCATTACTCTATCTTAAATACATCAATCTTTCCTACAATTTACTGTATGGAGAGATTCCAAATGGTGGCCCTTTTCAAAATTTTACTGCTCAATCTTTTATGATGAATAAAGATCTTTGTGGGAAATCCCAACTACAAGTCCAACCATGTAGGAAAGGAAACAAGCACGTATCCAATAAAGTGATGCTAATGATAAAATGCTTATTGCCTACCATTGTTGCCATGTTGATTGTTTTAGCCATTGTGATTCTAAAGAATAAGAGAGATGATAATAAAAATTCAATGAAAAGGGATTTAATAACTTGGGATACCCCAATCAGGATATCCTATTTTGAGCTTCTACGGGAAACAAATGGATTTGATGAGAGTAATCTTGTTGGTTCTGGAAGCTTTGGATCAGTATACAAAGCAATTCTTCCAAGTAAAAAGACAGTTGCTGTCAAAGTGTTTAACTTAGAGATTGAAGAAGCATCAAGAAGTTTTGATGTTGAATGTTCTGCCGTGTGCCATTTACGCCATCGCAATCTCATTAAGATCATCAGTAGTTGCTCAAATGGTCATTTCAAATCTCTAATAATGGAATTCATGGTAAATGGGAGTCTTGATAGATGGTTATATTCTCATAACCATTATTTAAATATCTTGCAAAGGTTAAACATAATGATTGATGTGGCAGCTGCTTTGGAGTATCTTCACTATGGTTCTTCTACACCAGTTGTTCATTGTGATGTGAAACCAAGCAATGTTTTGTTAGACGAAGATATGGAGGCTCATCTTAGTGATTTTGAGTTTGGATCGAAAGGAGTTGTTTCCACCAAAGGAGATGTGTACAGTTATGGGATTTTGCTAATGGAAATATTTACAAGGAAGAAGCCAACGGATGAAATGTTTGTTCAAGGACTAAGTTTGAAAGATTGGGTGAGCAACTCCACTCCACATTCCATCATGAATATTATAGATGTCAATTTACTACAGAGAGAAAATCAAAATACTGATAATATACTACCTTATATGTCATCAGTTTTTGAGTTAGCATTACATTGCTCCTCTGAATTACCAGAGGCACGACTTACTATGATTGATGTTGTAGCATCATTGAAAAAAATCAAGTCTTTGTTTATGGAAAATGCTTGA 1194 0.3526 MESLDLSHNYLSGVIPKPLESLLYLKYINLSYNLLYGEIPNGGPFQNFTAQSFMMNKDLCGKSQLQVQPCRKGNKHVSNKVMLMIKCLLPTIVAMLIVLAIVILKNKRDDNKNSMKRDLITWDTPIRISYFELLRETNGFDESNLVGSGSFGSVYKAILPSKKTVAVKVFNLEIEEASRSFDVECSAVCHLRHRNLIKIISSCSNGHFKSLIMEFMVNGSLDRWLYSHNHYLNILQRLNIMIDVAAALEYLHYGSSTPVVHCDVKPSNVLLDEDMEAHLSDFEFGSKGVVSTKGDVYSYGILLMEIFTRKKPTDEMFVQGLSLKDWVSNSTPHSIMNIIDVNLLQRENQNTDNILPYMSSVFELALHCSSELPEARLTMIDVVASLKKIKSLFMENA 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0684 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Acco03g0684 397 SUPERFAMILY L domain-like 2 58 - -
Acco03g0684 397 ProSitePatterns Protein kinases ATP-binding region signature. 146 168 IPR017441 GO:0005524
Acco03g0684 397 FunFam Serine-threonine protein kinase plant-type 121 215 - -
Acco03g0684 397 Gene3D Phosphorylase Kinase; domain 1 101 215 - -
Acco03g0684 397 Gene3D Ribonuclease Inhibitor 1 78 IPR032675 -
Acco03g0684 397 SUPERFAMILY Protein kinase-like (PK-like) 114 386 IPR011009 -
Acco03g0684 397 SMART serkin_6 140 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0684 397 ProSiteProfiles Protein kinase domain profile. 140 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0684 397 Pfam Protein kinase domain 141 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0684 397 Gene3D Transferase(Phosphotransferase) domain 1 286 396 - -
Acco03g0684 397 Gene3D Transferase(Phosphotransferase) domain 1 216 285 - -
Acco03g0684 397 PANTHER OS04G0122200 PROTEIN 3 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0684 Acco-ChrAcco03 10891460 10892943 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0684 1 395 Receptor kinase-like Gene Family AT3G47570 38.222 5.22e-87 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Acco03g0684 Pkinase 5.8e-28 CL0016