Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0680 ATGATAAGCTTGGAGTCCTTGGATCTCTCTAAAAATTATTTGTCTGGTGTGATTCCAAAATCATTGGAGTCACTTGTCTATCTGAAATACATAAACCTTTCATACAATTTATTGCAAGGAGAAATTCCAACTGGTGGTTCTTTTGGAAATTTTTCAGCTGATTCTTTTATGATGAATGAAGGTCTCTGTGGGAAGCCTCAACTACTTGTTCAGCCATGTAGGAAAGGAAACAAGCATAACTCAAGTAAAGTTATGTTGTTGATAGAATGCTCATCGCCTATCTTGTCTGTCCTTTTGGTTACTGTTCTGTGCATAGTCTTTCTAAAGCATAAGAAAGGTCATGTTAATGATTCAACTAATATGGATTTAATAAATTTTGAGACAACCACAAGGATATCTTATTATGAGCTTTTACGTGGAACAAATGAATTTGATGAAAGTAATCTTCTTGGAAGGGGAAGTTTTGGATCAGTCTACAAAGCAGTTCTTCCAAATGGAAAAATTGTTGCTGTTAAAGTATTTAATTCAAGCGTGGAAAGAGCCTTGAATAGTTTTGAAACTGAATGTGCTGCTATGTACAGTTTACGTCATCGCAATCTCACTAAGATGATTAGTGATTGCTCACGTGGTGAATTTAAATCCATAATAATGGAATTCATGCCAAATGGGAGTCTTGACAAATGGTTGCACTCAAATAACTATTATTTGGATATCTTGCAAAGGTTGGATATAATGATTGATGTGGCTGCTGCTTTGGAGTATCTCCATCATGGTTCTCCTATACCAATTGTTCATTGTGACATAAAACCGAGCAATATATTGTTGGATGAAAATATGGTGGCTCACCTCAGTGATTTTGGTATTGCCAAATTGTTGGCTGAAAGTCAGATGGAAATTTACACCAAGACTTTGGCTACAATTGGTTATATGGCACCAGAGTATGGATCAGAAGGAATTGTTTCATTTAAAGGAGATGTATATAGTTATGGCATTTTTTTGATGGAAATTCTTACAAGAAAGAAACCGACAGATGAGATGTTTGTTCAAGGTCTGAGTTTGAAAGATTGGGTTAGCAAATCAACACCTCATTCCATCATTAATATTCTAGATGCCAATTTGTTGTCAAGAGATTATCAAAATACTGACATCATATTGTCATATATATCACCACTTCTTGAGTTGGCCTTAGATTGCTGCATTGACTTACCTGGAGCGCGAATTAATATGAAGGATGTGGTGGTTAAACTTAACAAAATCAAGACCTCTTTTATAAAAAATGTTAGTGAAATTAACCACTAA 1299 0.3495 MISLESLDLSKNYLSGVIPKSLESLVYLKYINLSYNLLQGEIPTGGSFGNFSADSFMMNEGLCGKPQLLVQPCRKGNKHNSSKVMLLIECSSPILSVLLVTVLCIVFLKHKKGHVNDSTNMDLINFETTTRISYYELLRGTNEFDESNLLGRGSFGSVYKAVLPNGKIVAVKVFNSSVERALNSFETECAAMYSLRHRNLTKMISDCSRGEFKSIIMEFMPNGSLDKWLHSNNYYLDILQRLDIMIDVAAALEYLHHGSPIPIVHCDIKPSNILLDENMVAHLSDFGIAKLLAESQMEIYTKTLATIGYMAPEYGSEGIVSFKGDVYSYGIFLMEILTRKKPTDEMFVQGLSLKDWVSKSTPHSIINILDANLLSRDYQNTDIILSYISPLLELALDCCIDLPGARINMKDVVVKLNKIKTSFIKNVSEINH 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0680 432 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 220 429 - -
Acco03g0680 432 Pfam Leucine rich repeat 3 39 IPR001611 GO:0005515
Acco03g0680 432 SUPERFAMILY L domain-like 3 61 - -
Acco03g0680 432 SUPERFAMILY Protein kinase-like (PK-like) 123 416 IPR011009 -
Acco03g0680 432 Pfam Protein kinase domain 145 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0680 432 Gene3D Phosphorylase Kinase; domain 1 106 219 - -
Acco03g0680 432 SMART serkin_6 144 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0680 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Acco03g0680 432 PANTHER OS04G0122200 PROTEIN 5 425 - -
Acco03g0680 432 ProSiteProfiles Protein kinase domain profile. 144 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0680 432 ProSitePatterns Protein kinases ATP-binding region signature. 150 172 IPR017441 GO:0005524
Acco03g0680 432 Gene3D Ribonuclease Inhibitor 1 82 IPR032675 -
Acco03g0680 432 Gene3D Transferase(Phosphotransferase) domain 1 220 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0680 Acco-ChrAcco03 10798341 10799847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0680 1 425 Receptor kinase-like Gene Family AT3G47570 38.681 3.24e-92 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Acco03g0680 Pkinase 9.6e-45 CL0016