Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0665 ATGGAGTCCCTGGATCTTTCCCACAATTATTTGTCTGGCGTGATTCCAAAGCCCTTAGAGTCATTACTCTATCTTAAATACATCAATCTTTCCTACAATTTACTGTATGGAGAGATTCCAAATGGTGGCCCTTTTCAAAATTTTACTGCTCAATCTTTTATGATGAATAAAGATCTTTGTGGGAAATCCCAACTACAAGTCCAACCATGTAGGAAAGGAAACAAGCACGTATCCAATAAAGTGATGCTAATGATAAAATGCTTATTGCCTACCATTGTTGCCATGTTGATTGTTTTAGCCATTGTGATTCTAAAGAATAAGAGAGATGATAATAAAAATTCAATGAAAAGGGATTTAATAACTTGGGATACCCCAATCAGGATATCCTATTTTGAGCTTCTACGGGAAACAAATGGATTTAATGAGAGTAATCTTGTTGGTTCTGGAAGCTTTGGATCAGTATACAAAGCAATTCTTCCAAGTAAAAAGACAGTTGCTGTCAAAGTGTTTAACTTAGAGATTGAAGAAGCATCAAGAAGTTTTGATGTTGAATGTTCTGCCGTGTGCCATTTACGCCATCGCAATCTCATTAAGATCATCAGTAGTTGCTCAAATGGTCATTTCAAATCTCTAATAATGGAATTCATGGTAAATGGGAGTCTTGATAGATGGTTATATTCTCATAACCATTATTTAAATATCTTGCAAAGGTTAAACATAATGATTGATGTGGCAGCTGCTTTGGAGTATCTTCACTATGGTTCTTCTACACCAGTTGTTCATTGTGATGTGAAACCAAGCAATGTTTTGTTAGACGAAGATATGGAGGCTCATCTTAGTGATTTTGGTATTGCTAAATTGTTTGGTGAAAAGCAAGTGGAAATTTATACGAAAACTCTGGCAACAATTGGCTATATAGCACCAGAGTTTGGATCGAAAGGAGTTGTTTCCACCAAAGGAGATGTGTACAGTTATGGGATTTTGCTAATGGAAATATTTACAAGGAAGAAGCCAACGGATGAAATGTTTGTTCAAGGACTAAGTTTGAAAGATTGGGTGAGCAACTCCACTCCACATTCCATCATGAATATTATAGATGTCAATTTACTACAGAGAGAAAATCAAAATACTGATAATATACTACCTTATATGTCATCAGTTTTTGAGTTAGCATTACATTGCTCCTCTGAATTACCAGAGGCACGACTTACTATGATTGATGTTGTAGCATCATTGAAAAAAATCAAGTCTTTGTTTATGGAAAATGCTTGA 1272 0.3522 MESLDLSHNYLSGVIPKPLESLLYLKYINLSYNLLYGEIPNGGPFQNFTAQSFMMNKDLCGKSQLQVQPCRKGNKHVSNKVMLMIKCLLPTIVAMLIVLAIVILKNKRDDNKNSMKRDLITWDTPIRISYFELLRETNGFNESNLVGSGSFGSVYKAILPSKKTVAVKVFNLEIEEASRSFDVECSAVCHLRHRNLIKIISSCSNGHFKSLIMEFMVNGSLDRWLYSHNHYLNILQRLNIMIDVAAALEYLHYGSSTPVVHCDVKPSNVLLDEDMEAHLSDFGIAKLFGEKQVEIYTKTLATIGYIAPEFGSKGVVSTKGDVYSYGILLMEIFTRKKPTDEMFVQGLSLKDWVSNSTPHSIMNIIDVNLLQRENQNTDNILPYMSSVFELALHCSSELPEARLTMIDVVASLKKIKSLFMENA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0665 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Acco03g0665 423 Gene3D Transferase(Phosphotransferase) domain 1 216 422 - -
Acco03g0665 423 PANTHER OS04G0122200 PROTEIN 3 417 - -
Acco03g0665 423 ProSitePatterns Protein kinases ATP-binding region signature. 146 168 IPR017441 GO:0005524
Acco03g0665 423 SMART serkin_6 140 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0665 423 Gene3D Ribonuclease Inhibitor 1 78 IPR032675 -
Acco03g0665 423 Gene3D Phosphorylase Kinase; domain 1 101 215 - -
Acco03g0665 423 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 216 423 - -
Acco03g0665 423 ProSiteProfiles Protein kinase domain profile. 140 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0665 423 SUPERFAMILY L domain-like 2 58 - -
Acco03g0665 423 Pfam Protein kinase domain 141 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0665 423 FunFam Serine-threonine protein kinase plant-type 121 215 - -
Acco03g0665 423 SUPERFAMILY Protein kinase-like (PK-like) 114 412 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0665 Acco-ChrAcco03 10390484 10391967 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0665 1 421 Receptor kinase-like Gene Family AT3G47570 40.667 6.79e-98 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Acco03g0665 Pkinase 2.2e-44 CL0016