Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0657 ATGCTAATGATAAAATGCTTATTGCCTACCATTGTTGCCATGTTGATTGTTTTAGCCATTGTGGTTCTAAAGAATAACAGAGATGATGATAAAAATTCAACAAAGGGGGATTTAATAACTTTGGATACCCCGATTAGGATATCCTATTTTGAGCTTCTACGGGGAACAAATGGATTTGATGAGAGTAATCTTGTTGGTTCTGGAAGCTTTGGATCAATATATAAAGCAATTCTTCCAAGTAAAAAGACAGTTGCTGTCAAAGTGTTTAACTTAGAGATTGAAGAAGCATCAAGAAGTTTTGATGTTGAATGTTCTACCATGTGTCATTTACGCCACCGCAATCTCATTAAGATCATCAGTAGTTGCTCAAATGGTCATTTCAAATCTATAATAATGGAATTCATAGTAAATGGGAGTCTTGATAGATGGCTATACTCTGATAACTATTATTTAAATGTCTTGCAAAGGTTGAACATAATGATTGATGTGGCAGCTGCTTTGGAGTATCTTCACCATGGTTCTTCTACACTAGTTGTTCATTGTGATGTGAAACCAAGCAATGTTTTGTTGGATGAAGATATGGTGGCTCATCTTAGTGATTTTGGTATTGCTAAATTGTTTGGTGAAAAGCAAGTGGAAATTTATACCAAAACCTTGGCAACAATTGGCTATATAGCACCAGAGTTTGGATCGAAAGGAGTTGTTTCCACCAAAGGAGATGTGTACAGTTATGGGATTTTGCTAATGGAAATATTTACAAGGAAGAAGCCAACGGATGAAATGTTTGTTTAA 792 0.3523 MLMIKCLLPTIVAMLIVLAIVVLKNNRDDDKNSTKGDLITLDTPIRISYFELLRGTNGFDESNLVGSGSFGSIYKAILPSKKTVAVKVFNLEIEEASRSFDVECSTMCHLRHRNLIKIISSCSNGHFKSIIMEFIVNGSLDRWLYSDNYYLNVLQRLNIMIDVAAALEYLHHGSSTLVVHCDVKPSNVLLDEDMVAHLSDFGIAKLFGEKQVEIYTKTLATIGYIAPEFGSKGVVSTKGDVYSYGILLMEIFTRKKPTDEMFV 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0657 263 Gene3D Transferase(Phosphotransferase) domain 1 135 263 - -
Acco03g0657 263 ProSiteProfiles Protein kinase domain profile. 59 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0657 263 SMART serkin_6 59 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0657 263 FunFam Serine-threonine protein kinase plant-type 40 134 - -
Acco03g0657 263 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Acco03g0657 263 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 258 - -
Acco03g0657 263 Pfam Protein kinase domain 60 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0657 263 ProSitePatterns Protein kinases ATP-binding region signature. 65 87 IPR017441 GO:0005524
Acco03g0657 263 Gene3D Phosphorylase Kinase; domain 1 20 134 - -
Acco03g0657 263 SUPERFAMILY Protein kinase-like (PK-like) 35 261 IPR011009 -
Acco03g0657 263 FunFam Os07g0541700 protein 135 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0657 Acco-ChrAcco03 10114954 10115958 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0657 4 262 Receptor kinase-like Gene Family AT3G47570 45.161 3.74e-69 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Acco03g0657 Pkinase 5.5e-42 CL0016