Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0651 ATGACCTCTGTAGTTTGGAGTGAGAGTGATATCACCACGGACAAATCTGCACTTCTTACATTTAAATCCTTCGTCTATTTGGATCCATTCAATTTCTTAATAAATTGGTCTGTTTCTTCTTCTCCATGCAATTGGGTTGGTGTCACCTGCAATGCTCGTCACGAAAGGGTTCGTTCCTTACATATTAGTGGTATGAATCTCATTGGCATTATATCTCCACAACTAGGAAATTTGTCATCTCTTGTTGAACTTGATCTTAGTAGCAACAATTTTCATGGTCAAATACCGAAAGAATTGGTTCGACTACATAGATTAAAGCTGCTTAACTTGAGCTACAATGACTTTCGTGGACAAGTTCCAACGTGGATTGGAGCTTTATCTACACTTCAACACCTGGATCTTTGCAATAACAGTTTTAATGGATTTATTCCACCATCTTTCTCCAATTTATCGAAGTTGGAGACTTTGGATTGGAATTATAATTTCATTGAGGGGACCATTCCACATGAGATAGGAAATCTAAAACACTTGAAGATCCTACGACTTTCATATAACAAGCTTTCTGGAGCAATGCCCCAAACAATTTCCAACTTATCTTTACTTGAAAGATTGAGTTTATCTTATAATACTTTGTCAGGTGGCTTTCCAAGGGAAATTGGCAATCTTCCACAACTACGGTATGCTCAAACTTATACGCGTCCTTCTCTCTCCCTCCATCTTCCTTCTCTCTCTATATTTACAGGAAACATCCCTACAACATTGGGTGGCTTGCAAACTTTGTTAAACCTATCTTTGGCTCATAACAAATTACAAGGGCCTATACCTGAATCACTTGGTGGCATGGTAAGCTTGGAGTCCTTGGATCTCTCTAAAAATTACTTGTCTGGTGTGATTCCAAAATCATTAGAGTCACTTGTCCATCTGAAATACCTAAACCTTTCATACAATTTACTGCAAGGAGAAATTCCAAATGGTGGTTCTTTTGGAAATTTTTCAGCTGATTCTTTCATGATGAATGAAGGTCTTTGTGGGAAGCCTCAACTACTTGTTCAGCCATGTAGGAAAGGAAACAAGCATAACTCAAGTAAAGTTATGTTGTTGATAGAATGCTCATTGCCTATCTTGGCTGTCCTTTTGGTTACTGTTCTATGCATAGTCTTTCTAAAGCATAAGAATGGTCATGTTAATGATTCAACTAATAAGGATTTAATAAATTTTGAGACAACCACAAGGATATCTTATTATGAGATTTTACGTGGAACAAACGAATTTGATGAAAGTAATCTTCTTGGAAGGGGAAGTTTTGGATCAGTCTACAAAGCAGTTCTTCCAAATGGAAAAATTGTTGCTGTTAAAGTATTTAATTCAAGCGTGGAAAGAGCCTTGAATAGTTTTGAAACTGAATGTGCTGCTTTGTACAGTTTACGTCATCGCAATCTCACTAAGATGATTAGTGATTGCTCACATGGTGAATTTAAATCCATAATAATGGAATTCATGCCAAATGGGAGTCTTGAAAAATGGTTGCACTCAAATAACTATTATTTGGATATCTTGCAAAGGTTGAATATTATGATTGATGTGGCCGCTGCTTTGGAGTATCTCCATCATGGTTCTCCTACACCAATTGTTCATTGTGACATAAAACCGAGCAATATATTGTTGGATGAAGATATGGTGGCTCACCTCAGTGATTTTGAGTATGGATCAGAAGGAATTGTTTCATTTAAAGGAGACGTATATAGTTATGGCATTTTTTTGATGGAAATTCTTACAAGAAAGAAACCAACAGATGAGATGTTTGTTCAAGGTCTGAGTTTGAAAGATTGGGTTAGCAAATCAACACCTCATTCCATCATTAATATTCTAGATGCCAATTTGTTGTCAAGAGATTATCAAAATACTGACATCATATTGTCATATATATCACCACTTCTTGAGTTGGCCTTAGATTGCTGCATTGACTTACCTGGAGCGCGAATTAATATGAAGGATGTGGCGGTTAAACTTAACAAAATCAAGACCTCTTTTATAAAAAATGTTAGTGAAATTAACCACTAA 2061 0.3629 MTSVVWSESDITTDKSALLTFKSFVYLDPFNFLINWSVSSSPCNWVGVTCNARHERVRSLHISGMNLIGIISPQLGNLSSLVELDLSSNNFHGQIPKELVRLHRLKLLNLSYNDFRGQVPTWIGALSTLQHLDLCNNSFNGFIPPSFSNLSKLETLDWNYNFIEGTIPHEIGNLKHLKILRLSYNKLSGAMPQTISNLSLLERLSLSYNTLSGGFPREIGNLPQLRYAQTYTRPSLSLHLPSLSIFTGNIPTTLGGLQTLLNLSLAHNKLQGPIPESLGGMVSLESLDLSKNYLSGVIPKSLESLVHLKYLNLSYNLLQGEIPNGGSFGNFSADSFMMNEGLCGKPQLLVQPCRKGNKHNSSKVMLLIECSLPILAVLLVTVLCIVFLKHKNGHVNDSTNKDLINFETTTRISYYEILRGTNEFDESNLLGRGSFGSVYKAVLPNGKIVAVKVFNSSVERALNSFETECAALYSLRHRNLTKMISDCSHGEFKSIIMEFMPNGSLEKWLHSNNYYLDILQRLNIMIDVAAALEYLHHGSPTPIVHCDIKPSNILLDEDMVAHLSDFEYGSEGIVSFKGDVYSYGIFLMEILTRKKPTDEMFVQGLSLKDWVSKSTPHSIINILDANLLSRDYQNTDIILSYISPLLELALDCCIDLPGARINMKDVAVKLNKIKTSFIKNVSEINH 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0651 686 Gene3D Ribonuclease Inhibitor 243 346 IPR032675 -
Acco03g0651 686 Pfam Protein kinase domain 425 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0651 686 SMART serkin_6 424 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0651 686 ProSitePatterns Protein kinases ATP-binding region signature. 430 452 IPR017441 GO:0005524
Acco03g0651 686 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 125 215 - -
Acco03g0651 686 SUPERFAMILY Protein kinase-like (PK-like) 404 669 IPR011009 -
Acco03g0651 686 Gene3D Phosphorylase Kinase; domain 1 387 499 - -
Acco03g0651 686 Gene3D Transferase(Phosphotransferase) domain 1 500 568 - -
Acco03g0651 686 Gene3D Transferase(Phosphotransferase) domain 1 569 685 - -
Acco03g0651 686 Pfam Leucine rich repeat N-terminal domain 13 51 IPR013210 -
Acco03g0651 686 SMART LRR_typ_2 174 197 IPR003591 -
Acco03g0651 686 SMART LRR_typ_2 126 149 IPR003591 -
Acco03g0651 686 SMART LRR_typ_2 305 329 IPR003591 -
Acco03g0651 686 SMART LRR_typ_2 198 222 IPR003591 -
Acco03g0651 686 SMART LRR_typ_2 78 102 IPR003591 -
Acco03g0651 686 SMART LRR_typ_2 281 304 IPR003591 -
Acco03g0651 686 ProSiteProfiles Protein kinase domain profile. 424 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0651 686 Gene3D Ribonuclease Inhibitor 9 160 IPR032675 -
Acco03g0651 686 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 234 350 - -
Acco03g0651 686 Gene3D Ribonuclease Inhibitor 161 239 IPR032675 -
Acco03g0651 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
Acco03g0651 686 FunFam Leucine-rich repeat receptor-like kinase 14 124 - -
Acco03g0651 686 SUPERFAMILY L domain-like 35 332 - -
Acco03g0651 686 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 66 664 - -
Acco03g0651 686 Pfam Leucine rich repeat 128 187 IPR001611 GO:0005515
Acco03g0651 686 Pfam Leucine rich repeat 56 115 IPR001611 GO:0005515
Acco03g0651 686 Pfam Leucine rich repeat 260 318 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0651 Acco-ChrAcco03 9863733 9869365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0651 56 679 Receptor kinase-like Gene Family AT3G47570 36.950 1.58e-116 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Acco03g0651 Pkinase 1.2e-28 CL0016