LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco03g0583	ATGGATAGCTTCGCGCTTCACTCCCTACCCCACTCGACCTCTTTCTCTCTCTATTCCCCTCCCACTTCCTTCCTCCGTCGTCGTTCTGTTCCTTTGATTCCAAACTCCCCTTCAATCCCATCTCTCCCACCAACGATCCCTCCTTTCCCCTTCTTTCCCTCCAAAACTTCTTCCACCTTAAATCCTCTCTCTGAACTTCGCATCGCGAATCACCCAATTCAAGCTTCGTTTTCTTCTTCGTCATCTTCGCCGGCATTACCCTCATCCTCATCCCCAGTTACTCAAGGTGCCAAACCTTTACCATTGTTTATCTCCATTTCTATTGGTCTCATTGTTCGCTTCTTTGTTCCGAAGCCCGTTGAAGTTACCCCTCAAGCGTGGCAATTGCTCTCGATTTTTCTATCAACTATTGCGGGTCTTGTTCTGACTCCATTGCCCGTGGGAGCTTGGGTTTTTATAGGTTTAACAGTCTCCGTTGTGACTAATACACTGAGTTTTTCCGCGGCTTTTCACGCGTTCACTCACGAGATTATTTGGTTGATTGTGATTTCCTTCTTCTTCGCTCGTGGATTTGTGAAAACTGGGTTGGGAGATAGGATTGCGACTTACTTCGTGAAGTGGTTGGGAAAGAGTACATTGGGGCTGTCTTATGGGTTGATTTTTAGCGAAGTGTTGATTGCACCAGCGTTGCCCAGCACCACCGCGAGGGCCGGTGGCGTCTTCCTGCCGATTATCAAGTCACTGTCGCTCTCAGCAGGGAGTGAACCCAATCATCCTACTTCCAGAAAGCTGGGATCTTATCTTATCCAGACGCAATTTCATTCTGCTGGTCATTCTAGTGCTCTTTTCCTAACTGCTTCTGCTCAAAACCTGCTGTGTCTTAAATTAGCAGAGGAGCTTGGGGTGATAATTGCAAATCCATGGGTTACATGGTTTAAAGTGGCTAGTTTACCTGCATTGGCTTCTCTTCTTGCTACACCATTGATTTTATACAAACTACATCCACCTGAAATGAAAGACACACCGGAGGCGCCTGCCATGGCTGCAGCCAAACTGGAAAATATGGGTCCTGTCACTCGAAATGAATGGATTATGATTGGGACAATGCTGCTTGCAGTCTCTTTGTGGGTCTTTGGAGAGACTCTTGGTATACCAAGTGCCGTAGCTGCAATGATTGGCTTATCAGTACTCCTTGCACTGGGAGTCCTTGATTGGAATGATTGCTTGAATGAAAAATCAGCATGGGATACACTCTCTTGGTTTGCGATTTTAGTGGGGATGAGTGGCCAGTTGACAAACCTTGGGATTGTTGGTTGGATGTCTACTTGTATGGCCAAGACTCTTCAGTCTTTCTCTCTGAGCTGGCCTGCTTCACTCTTCGTTCTGCTAGCTTCTTATTTTTTCATCCACTACATTTTCGCTAGTCAGACCGGGCATATTTTGGCCTTTTACTCTGCATTTCTCACTATGAACCAGGTGGCTGGTGTTCCTGCTGTGCTGGCAGCGCTTGCTCTTGCATATGTCGCAGATCTTTTTGGTTCAATAACACATTATAGTAGCGGCCAGGCTGCTGTATATTATGGAGCTGGTTATACAGAGCTTCCTGATATAATCAAAATTGGGTTCATTATGGCTTTTTTAAATGCTGTCATCTGGGGAGTTGTTGGTTCTTTGTGGTGGAAATTTTTGGGCTTGTATTGA	1701	0.4597	MDSFALHSLPHSTSFSLYSPPTSFLRRRSVPLIPNSPSIPSLPPTIPPFPFFPSKTSSTLNPLSELRIANHPIQASFSSSSSSPALPSSSSPVTQGAKPLPLFISISIGLIVRFFVPKPVEVTPQAWQLLSIFLSTIAGLVLTPLPVGAWVFIGLTVSVVTNTLSFSAAFHAFTHEIIWLIVISFFFARGFVKTGLGDRIATYFVKWLGKSTLGLSYGLIFSEVLIAPALPSTTARAGGVFLPIIKSLSLSAGSEPNHPTSRKLGSYLIQTQFHSAGHSSALFLTASAQNLLCLKLAEELGVIIANPWVTWFKVASLPALASLLATPLILYKLHPPEMKDTPEAPAMAAAKLENMGPVTRNEWIMIGTMLLAVSLWVFGETLGIPSAVAAMIGLSVLLALGVLDWNDCLNEKSAWDTLSWFAILVGMSGQLTNLGIVGWMSTCMAKTLQSFSLSWPASLFVLLASYFFIHYIFASQTGHILAFYSAFLTMNQVAGVPAVLAALALAYVADLFGSITHYSSGQAAVYYGAGYTELPDIIKIGFIMAFLNAVIWGVVGSLWWKFLGLY	566

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco03g0583	566	Pfam	Sodium:sulfate symporter transmembrane region	101	565	IPR001898	GO:0016020\|GO:0022857\|GO:0055085
	Acco03g0583	566	NCBIfam	DASS family sodium-coupled anion symporter	118	560	IPR001898	GO:0016020\|GO:0022857\|GO:0055085
	Acco03g0583	566	PANTHER	DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC	72	566	IPR030676	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco03g0583	Acco-ChrAcco03	8403924	8408705	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco03g0583	1	566	Antiporters	AT5G64290	69.775	0.0	781