Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0577 ATGTACGGCCACGAACGGCACTCTCTACTCTGTCTCTCTCCTTTTCCATTGCTCCTTGTCGTCGTCTTCGTCTCCCAGTATACAGATCGTCCCTCGTCGCCGCACTCCCTACTCCGAACCATGAGGCCGATTTTGATGAAGGGCCACGAGAGGCCACTGACGTTTCTCAAGTACAACAGAGATGGAGATCTTCTTTTCTCTTGTGCTAAGGATCACAATCCCACCGTATGGTTCGCGGATAATGGTGAACGCTTGGGCACTTATCGTGGACATAACGGCGCTGTTTGGTGCTGTGATGTCTCAAGAGATTCAATGCAGCTTATAACGGGAAGTGCGGATCAGACGGCAAAGCTATGGAATGTTCAAACCGGGCAGCAGTTGTTCACATTCAATTTTGATTCTCCTGCTAGGTCTGTGGATTTTGCCGTGGGAGACAAACTTGCTGTTATTACAACTGATCCCTTCATGGAATTGTCTTCTGCAATTCATGTCAAACGCATTGCTAGAGACACCAGTGACCAGACTGGCGAATCCATACTTGTCATTAAAGGCCCTCAGGGAAGAATAAATAGAGCCATTTGGGGGCCACTAAACAAAACTATTATTAGTGCTGGAGAAGATGCAGTTATCCGTATATGGGATTCTGAGACAGGAAAGCTACTTAAGGAGGCAGACAAGGAATCTGGCCACAAGAAGACAATAACATCTCTTGCAAAATCTGCTGATGGCTCCCATTTCCTGACTGGCTCCCTTGATAAATCGGCTAAGCTCTGGGATGCCAGATCACTGTCTCTTATCAAGACATATAAAACTGAACGCCCAGTCAATGCAGTGGCCATGTCACCTCTTCTTGACCATGTGGTGCTTGGAGGTGGTCAAGATGCATCAGCTGTCACTACTACTGATCATCGTGCTGGAAAATTTGAAGCCAAGTTTTTTGACAAGATTCTTCAAGAAGAAATTGGGGGTGTGAAGGGACATTTTGGACCAATCAATGCACTTGCCTTTAATCCTGATGGCAAGAGCTTTTCAAGTGGAGGTGAAGATGGTTATGTGAGGTTGCATCACTTTGACCCAGACTACTTCAATATTAAAATTTAG 1101 0.4596 MYGHERHSLLCLSPFPLLLVVVFVSQYTDRPSSPHSLLRTMRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMQLITGSADQTAKLWNVQTGQQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELSSAIHVKRIARDTSDQTGESILVIKGPQGRINRAIWGPLNKTIISAGEDAVIRIWDSETGKLLKEADKESGHKKTITSLAKSADGSHFLTGSLDKSAKLWDARSLSLIKTYKTERPVNAVAMSPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFFDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDPDYFNIKI 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0577 366 ProSiteProfiles Trp-Asp (WD) repeats profile. 227 268 IPR001680 GO:0005515
Acco03g0577 366 Pfam WD domain, G-beta repeat 323 354 IPR001680 GO:0005515
Acco03g0577 366 Pfam WD domain, G-beta repeat 83 120 IPR001680 GO:0005515
Acco03g0577 366 Pfam WD domain, G-beta repeat 228 259 IPR001680 GO:0005515
Acco03g0577 366 CDD WD40 47 354 - -
Acco03g0577 366 Hamap Eukaryotic translation initiation factor 3 subunit I [EIF3I]. 41 366 IPR027525 GO:0003743|GO:0005737|GO:0005852
Acco03g0577 366 ProSitePatterns Trp-Asp (WD) repeats signature. 107 121 IPR019775 -
Acco03g0577 366 Gene3D - 41 366 IPR015943 GO:0005515
Acco03g0577 366 SMART WD40_4 81 120 IPR001680 GO:0005515
Acco03g0577 366 SMART WD40_4 175 214 IPR001680 GO:0005515
Acco03g0577 366 SMART WD40_4 217 259 IPR001680 GO:0005515
Acco03g0577 366 SMART WD40_4 317 356 IPR001680 GO:0005515
Acco03g0577 366 SMART WD40_4 34 78 IPR001680 GO:0005515
Acco03g0577 366 SMART WD40_4 262 301 IPR001680 GO:0005515
Acco03g0577 366 ProSitePatterns Trp-Asp (WD) repeats signature. 201 215 IPR019775 -
Acco03g0577 366 SUPERFAMILY WD40 repeat-like 39 354 IPR036322 GO:0005515
Acco03g0577 366 ProSiteProfiles Trp-Asp (WD) repeats profile. 88 129 IPR001680 GO:0005515
Acco03g0577 366 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 88 125 - -
Acco03g0577 366 ProSiteProfiles Trp-Asp (WD) repeats profile. 46 87 IPR001680 GO:0005515
Acco03g0577 366 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 182 219 - -
Acco03g0577 366 ProSiteProfiles Trp-Asp (WD) repeats profile. 324 354 IPR001680 GO:0005515
Acco03g0577 366 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 227 262 - -
Acco03g0577 366 ProSiteProfiles Trp-Asp (WD) repeats profile. 182 223 IPR001680 GO:0005515
Acco03g0577 366 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 41 365 - -
Acco03g0577 366 PRINTS G protein beta WD-40 repeat signature 246 260 IPR020472 -
Acco03g0577 366 PRINTS G protein beta WD-40 repeat signature 107 121 IPR020472 -
Acco03g0577 366 PRINTS G protein beta WD-40 repeat signature 201 215 IPR020472 -
Acco03g0577 366 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 324 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0577 Acco-ChrAcco03 8316425 8321277 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0577 8 366 Eukaryotic Initiation Factors Gene Family AT2G46290 75.414 0.0 567