Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0576 ATGGCTTCCATTCATCATCCATGTCCACCAGGAGCCTGTGACTATGAAGCCAGGCACAGCTTTCGAGCTGGTGGACGAGGGCTACAGATTGAAACGACGACGTTAGGTGTTGAAGAAACAAGAAGAAGGAAGAAGCAGAGTGATGAAATGGATGGAGAAGAGAAGGGGACATGGCTGACGTGGAAGGATGTGTGGGTGACAGCTTCTAATAAAACTGGAAGCAGAAGAAGGACAATACTTGGAGGTCTGAGTGGTTATGCAAAACCAGGCCAGCTTTTGGCCATCATGGGTCCTTCTGGTTGTGGCAAGTCCACTCTTCTTGATACTTTAGCAGGGAGATTAGGTTCAAATACAAGACAAACAGGGGAAATTCTTATAAATGGCCACAAACAAGCACTTGCTTATGGGACATCGGCATATGTGACACAAGATGACACTTTACTCACAACCCTGACAGTTGGAGAAGCAGTGCACTATTCAGCCCAGCTTCAACTACCAGACACAATGTCAAAGGAAGAGAAAAGGGAAAGAGCAGAGTTCACAATAAGAGAAATGGGTCTACAAGACGCCATTAACACCAGAATTGGAGGTTGGGGCTTCAAGGGAATAAGTGGAGGCCAAAAGAGAAGAGTGAGTATCTGCATAGAGATCCTCACACGTCCGAGGCTTTTGTTTCTTGATGAACCAACCAGTGGACTTGACAGTGCAGCCTCGTACTATGTGATGAGCCGAATCGCAAGCCTCGATCGAAAAGATGGAATTCAAAGGACCATTATTGCTTCCATTCATCAGCCTAGTACAGAAGTTTTTCAGCTCTTTGATAATCTTTGCCTTCTTTCTTCTGGAAGAACTGTTTTCTTCGGTCCTGCTTCTGCAGCAAGTGAGTTCTTTGCTTCAAATGGCTTTCCTTGTCATGCCCTCCAGAATCCATCGGATCATTTCTTGAAAACTATAAACAAGGATTTTGATGATAATCAGGACATTGAACTGGGCTTAGCTGGCACTCAAAGGAAACCTTCAGAAGAAGCAATCGAAATTCTTGTCAAGTCATACAAGTCTTCTGATTTGAACCGACAAGTTCAAGCAGAAGTAGCAGAATTATCTACACAGGGAAATGGAATGGTAGAGAAGAAGAAGAAGAAGAGAGGGTATGCAAGCTTCCATACTCAGTGCATTGTTCTTACAAAGAGATCATTCGTGAACATGCGTCGTGATGTAGGCTATTACTGGTTACGCCTTGTCATATACGTCGCTGTGGCTCTAGGTTTGGCCACTGTGTTCTATGATCTGGGCATGAGCGAGGGGTCTATTAAAGATAGAGCTGCACTTCTTGCTTTTGTTTCTTCCTTCATAACTTTCATGACCATTGGTGGATTCCCCTCCTTCGTTGAAGATATGAAGGTATTTCAAAGGGAAAGGTTAAATGGGCACTATGGAGTGACAGCTTATGTGATAGGAAACACCTTATCTTCAATCCCATATCTATTACTCGTCACTCTCATTCCTGGAGCCATAGCCTACTACCTCCCAGGTCTTCAAAAAACTGCTGAACACTTCATCTTCTTCTGCAGTGTCCTCTTTTCATGTCTGATGCTAGTTGAAAGCCTCATGATGATAGTGGCCAGCATTGTCCCTAACTTCCTCATGGGAATCATAACTGGTGCTGGTCTTCAAGGCATCATGATACTCGCCGGCGGCTTCTTTAGATTGCCCGATGACCTCCCCAGAATATTCTGGAAGTATCCTCTCCACTATGTCGCCTTCCATAGATATGCCTACCAAGGTCTGTTCAAGAATGAGTATGAAGGACTCAGGATTGCTGGTAAAAGTGGGGAATATATTCTAAGAAGCATATGGCAAGTTAACATGAGTTATTCTAAGTGGGTTGATCTTGCAATTCTTCTGGGGATTATTGTTGTGTATAGAGTTGTGTTCTTGGCAATCATCAAAGGAACTGAGAAGATGAAGCCTTTGGTTTCTTCGTTGTTTTCTGGGCCTCCTAAGAGAAGCATTCATATCATGGTCAATCCATATGCTACTTCTTTTCATGAAGGGGCTACATAA 2064 0.4375 MASIHHPCPPGACDYEARHSFRAGGRGLQIETTTLGVEETRRRKKQSDEMDGEEKGTWLTWKDVWVTASNKTGSRRRTILGGLSGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQTGEILINGHKQALAYGTSAYVTQDDTLLTTLTVGEAVHYSAQLQLPDTMSKEEKRERAEFTIREMGLQDAINTRIGGWGFKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLDRKDGIQRTIIASIHQPSTEVFQLFDNLCLLSSGRTVFFGPASAASEFFASNGFPCHALQNPSDHFLKTINKDFDDNQDIELGLAGTQRKPSEEAIEILVKSYKSSDLNRQVQAEVAELSTQGNGMVEKKKKKRGYASFHTQCIVLTKRSFVNMRRDVGYYWLRLVIYVAVALGLATVFYDLGMSEGSIKDRAALLAFVSSFITFMTIGGFPSFVEDMKVFQRERLNGHYGVTAYVIGNTLSSIPYLLLVTLIPGAIAYYLPGLQKTAEHFIFFCSVLFSCLMLVESLMMIVASIVPNFLMGIITGAGLQGIMILAGGFFRLPDDLPRIFWKYPLHYVAFHRYAYQGLFKNEYEGLRIAGKSGEYILRSIWQVNMSYSKWVDLAILLGIIVVYRVVFLAIIKGTEKMKPLVSSLFSGPPKRSIHIMVNPYATSFHEGAT 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0576 687 CDD ABCG_EPDR 59 288 - -
Acco03g0576 687 Pfam ABC-2 type transporter 263 327 IPR043926 GO:0140359
Acco03g0576 687 Pfam ABC-2 type transporter 389 601 IPR013525 GO:0016020|GO:0140359
Acco03g0576 687 Gene3D - 45 312 IPR027417 -
Acco03g0576 687 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 59 306 IPR003439 GO:0005524
Acco03g0576 687 SMART AAA_5 89 283 IPR003593 GO:0016887
Acco03g0576 687 Pfam ABC transporter 83 231 IPR003439 GO:0005524
Acco03g0576 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 295 IPR027417 -
Acco03g0576 687 ProSitePatterns ABC transporters family signature. 203 217 IPR017871 GO:0005524|GO:0016887
Acco03g0576 687 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 48 662 - -
Acco03g0576 687 FunFam ABC transporter G family member 11 57 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0576 Acco-ChrAcco03 8284268 8290968 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0576 79 267 Calmodulin-binding Proteins AT2G36910 30.102 6.37e-10 60.8