Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0561 ATGGCTTCCCTTCATCCTCCATATCCATCAAGAGCCTCTGATTATGAAGCTGGTGGGCTAGAGACTGAAACGACGACGTTAGGTGTGGAAGAAACAACAAGAAGGAAGAAGAAGGGTGATGAAATGGATGGAGGAGAAGAGAAGGGGATATGGCTGACATGGAAGGATGTGTGGGTGACAGCTTCTAATACAACTGGGAAGAAGAAGAAGAAAGAGATTATTAATAATGGGAAAGGAAGCATAAGAAGAAGACGAACAATACTTGAAGGTCTGAGTGGTTATGCAAAACCAGGCCAGCTTTTGGCCATTATGGGTCCTTCTGGTTGTGGAAAATCCACTCTTCTTGATACTTTAGCAGGGAGATTACGTTCAAATACAAGGCAAACTGGGGAAATTCTTATTAATGGCCGCAAACAAACACTTGCTTATGGGACGTCGGCATATGTGACACAAGATGACACCTTGCTCACAACCCTAACAGTTGGAGAAGCAGTGTACTATTCAGCCCAGCTTCAACTACCAGACACAATGTCGAAGGAAGAGAAAAGGGAAAGAGCAGAGTTCACAATAAGAGAAATGGGTCTACAAGACGCCATTAACACCAGAATTGGAGGTTCGGCCTTCAAGGGAATAAGTGGAGGCCAAAAGAGAAGAGTGAGTATCTGCATAGAGATCCTCACACGTCCGAGGCTTTTGTTTCTTGATGAACCAACCAGCGGACTTGACAGTGCAGCCTCGTACTATGTGATGAGCCGAATCGCAAGCCTCGATCGAAAGGATGGGATTCAAAGGACCATTATTGCTTCCATTCATCAGCCTAGTACTGAAGTGTTTCAGCTCTTTGATAATCTTTGTCTTCTTTCTTCTGGAAGAACTGTGTTCTTTGGTCCTGCTTCTGCTGCAAGTGAGTTCTTTGCTTCAAATGGGTTTCCTTGTCCTGCTCTCCAGAATCCATCTGATCATTTCTTGAAAACTATAAACAAGGATTTTGATGATCAGGACATTGAACTGGGCTTAGCGGGAAATCAAAGGAAACCAACAGAAGAAGCAATAAAAATGATTGTCAAGTCATACGAGTCTTCAAATTTGAAAAAACAAGTTCAAGCAGAAGTAGCAGCACTATCTGCAATGGAAAGTGGCATAGTGGAGAAGAAGAAGAGAGGGCATGCAAACTTCCTTACTCAATGCATTGTTCTTGCGAAGAGATCATCCGTGAACATGCGTCGCGATGTAGGCTACTACTGGCTACGCCTTGCCGTATACGTCTTTGTGGCTGTAGCTTTGGCGACTGTGTTCTATGATTTGGGCATGGGCATGGAGTCTATTCCAGAAAGAGGTGCGCTTCTTGCATTTGTGTCTTCCTTCATTACTTTCATGACCATTGGTGGTTTCCCTTCCTTTGTTGAAGATATGAAGGTATTTGAAAGGGAAAGGCTAAATGGGCACTATGGAGTGACAGCCTATGTAATAGGGAACACCTTATCTTCAATCCCATACCTATTCCTCATCAGTCTCATTCCTGGAGTCATAGCCTACTACCCCCCAGGCCTTCAAAAATCTGTTGAAAAGTTCGTGTTCTTCTTCAGCGTCTTGTTTTCATGTTTGATGCTAGTTGAAAGCCTGATGATGATAGTGGCGAGCATCATTCCTGACTTCCTCATGGGAATCATAATTGGTGCTGGTATTCAAACCATCATGATCCTAGCAGGAGGCTTTTTCAAAGTTCCAAATGCACTTCCTAGAATCATCTGGAAGTATCCTCTACACTACGTCGCCTTCCATAGATATGCCTACCAAGGACTGTTCAAGAACGAGTTTGAAGGACTCATGTTTGGTAGTTCAAGTGGGGAAGATATTTTAAGAAGCAAATGGCAAGTTAACATGAGCTATTCTAAGTGGGTTGATCTTGCCATTCTTCTGGGGATGATTGTTTTGTACAGAGTTGTGTTCTTGGTGATCATCAAGGGCACCGAGAAGATGAAGCCCTTATTTGCTTCTTTGGTAGCTGCTAAAAGGGCTGATCTGAGAGCATTTGTTTATGTGCACGAGGTAAAAATAAGGAAGCTACCCAGGAGGAGTTCATCTACAAGAAATGACAGCAATCGAGGAGTAAATAAGCGAGAGGTGAAAATGAAAAGTTGGTTTCTTCATGGCGACTGGCGAGTGCGCAATCAAGGAGTAAATAAGCGCCAGGTGAAAATGAAAAGTTGGTTTCTTTATGGCGAGTGTGGAGAAAAGAAAAGTAAGATAATAATAATAAGTTTTATTTAA 2271 0.4289 MASLHPPYPSRASDYEAGGLETETTTLGVEETTRRKKKGDEMDGGEEKGIWLTWKDVWVTASNTTGKKKKKEIINNGKGSIRRRRTILEGLSGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLRSNTRQTGEILINGRKQTLAYGTSAYVTQDDTLLTTLTVGEAVYYSAQLQLPDTMSKEEKRERAEFTIREMGLQDAINTRIGGSAFKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLDRKDGIQRTIIASIHQPSTEVFQLFDNLCLLSSGRTVFFGPASAASEFFASNGFPCPALQNPSDHFLKTINKDFDDQDIELGLAGNQRKPTEEAIKMIVKSYESSNLKKQVQAEVAALSAMESGIVEKKKRGHANFLTQCIVLAKRSSVNMRRDVGYYWLRLAVYVFVAVALATVFYDLGMGMESIPERGALLAFVSSFITFMTIGGFPSFVEDMKVFERERLNGHYGVTAYVIGNTLSSIPYLFLISLIPGVIAYYPPGLQKSVEKFVFFFSVLFSCLMLVESLMMIVASIIPDFLMGIIIGAGIQTIMILAGGFFKVPNALPRIIWKYPLHYVAFHRYAYQGLFKNEFEGLMFGSSSGEDILRSKWQVNMSYSKWVDLAILLGMIVLYRVVFLVIIKGTEKMKPLFASLVAAKRADLRAFVYVHEVKIRKLPRRSSSTRNDSNRGVNKREVKMKSWFLHGDWRVRNQGVNKRQVKMKSWFLYGECGEKKSKIIIISFI 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0561 756 ProSitePatterns ABC transporters family signature. 211 225 IPR017871 GO:0005524|GO:0016887
Acco03g0561 756 SMART AAA_5 97 291 IPR003593 GO:0016887
Acco03g0561 756 Pfam ABC-2 type transporter 271 328 IPR043926 GO:0140359
Acco03g0561 756 Gene3D - 63 310 IPR027417 -
Acco03g0561 756 FunFam ABC transporter G family member 11 50 357 - -
Acco03g0561 756 Pfam ABC-2 type transporter 394 606 IPR013525 GO:0016020|GO:0140359
Acco03g0561 756 MobiDBLite consensus disorder prediction 28 45 - -
Acco03g0561 756 MobiDBLite consensus disorder prediction 1 45 - -
Acco03g0561 756 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 303 IPR027417 -
Acco03g0561 756 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 68 314 IPR003439 GO:0005524
Acco03g0561 756 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 41 671 - -
Acco03g0561 756 Pfam ABC transporter 89 239 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0561 Acco-ChrAcco03 7933878 7946572 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0561 87 275 Calmodulin-binding Proteins AT2G36910 29.897 8.37e-10 60.5