Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0553 ATGCATAGAAGTCGAGAATTGAAGAGAGATGGTTCGGTGACAATTGGTGGCGAGTGTTGTGGCGCTGGGCAAGGTCCCGTAGAAAAAACTCCGGTAAGGTCTGACCGGAAAATCCAAACAAGTGGATCTGAAGGTGAAGAAGTACCGCGGCGTTCGACTGCGGCCGTGGGACAGTGGTTGGCAGAGATTAGAGACCCTGCGCATGGGCCAAGGCTGTGGCTGGGAACTTTCAACGTGGTGGAGGAGGCGGCGGTGTCGTCTAACAAAGCAGCAGCGAGGCACGAGTCCCAACCCCAGTCCCAGAGTTTCGGTTAG 315 0.5587 MHRSRELKRDGSVTIGGECCGAGQGPVEKTPVRSDRKIQTSGSEGEEVPRRSTAAVGQWLAEIRDPAHGPRLWLGTFNVVEEAAVSSNKAAARHESQPQSQSFG 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0553 104 Gene3D AP2/ERF domain 48 101 IPR036955 GO:0003700|GO:0006355
Acco03g0553 104 PANTHER DNA-BINDING DOMAIN 56 93 IPR044808 GO:0003700|GO:0009873
Acco03g0553 104 SMART rav1_2 48 100 IPR001471 GO:0003700|GO:0006355
Acco03g0553 104 MobiDBLite consensus disorder prediction 1 54 - -
Acco03g0553 104 ProSiteProfiles AP2/ERF domain profile. 42 104 IPR001471 GO:0003700|GO:0006355
Acco03g0553 104 MobiDBLite consensus disorder prediction 30 44 - -
Acco03g0553 104 SUPERFAMILY DNA-binding domain 56 94 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0553 Acco-ChrAcco03 7812300 7812693 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0553 21 91 AP2-EREBP Transcription Factor Family AT2G40350 38.158 1.83e-09 50.4