Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0537 ATGGCCTTTTTATTTGTGCACTTCCTGGAAGGTAAGCGACTCGATTTGTGCGTGAACCGTCCATGCTTTTTCTATGGTGTTCGCTCAATAGGGTATGTACCCAGCCAGTTCATTTGCTGCGGAAAGAAAGCCACTCTTGTTGTCGGCGACGTCTTGCCCATCAAATCCATTCCTGAAGAGCTATTATATGCCATGTGGAGCATCATGTGGTGTGTTCGTGGCGTGTTCGTTAGGTGTTCCGGTGATCATGCTATTGTTATTAGTCATAACCCTGATAACGATACATCTAGGAATGATTTAGAGAACTTGAGCTCTTTCTTGATTTTAAATAGTACTGACCCCTTGGTTAATAATGTTCATGTGCCTTCACAACAGCACCAAACTTCCATCTGGGGCAAAGAAGATTGTTCCAAGTGGTTATCGTGCCATGATTGGCCTAAGGTACGTGGTGAGGCTATGAACCCAGTTGAGCGTCCTCATGGAGGAGGTAACCACCAGCATATTGGACTTGCTAGTACCGTAAGGCGTGATGCTACTTCTTGTGCATGGACATTGGTGTTACAGAAGAATATAAAAATTGGTAGCCTTCTTGTCTATTCAATATTGAACATCCCTAACGCAATACATCGAAGATGA 636 0.4387 MAFLFVHFLEGKRLDLCVNRPCFFYGVRSIGYVPSQFICCGKKATLVVGDVLPIKSIPEELLYAMWSIMWCVRGVFVRCSGDHAIVISHNPDNDTSRNDLENLSSFLILNSTDPLVNNVHVPSQQHQTSIWGKEDCSKWLSCHDWPKVRGEAMNPVERPHGGGNHQHIGLASTVRRDATSCAWTLVLQKNIKIGSLLVYSILNIPNAIHRR 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0537 211 SMART Ribosomal_L2_C_2 46 180 IPR022669 GO:0003735|GO:0005840|GO:0006412
Acco03g0537 211 Pfam Ribosomal Proteins L2, C-terminal domain 48 169 IPR022669 GO:0003735|GO:0005840|GO:0006412
Acco03g0537 211 SUPERFAMILY Translation proteins SH3-like domain 49 179 IPR008991 -
Acco03g0537 211 PANTHER RIBOSOMAL PROTEIN L2 30 178 IPR002171 GO:0003735|GO:0005840|GO:0006412
Acco03g0537 211 Coils Coil 208 211 - -
Acco03g0537 211 Gene3D Ribosomal protein L2, domain 3 131 189 IPR014726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0537 Acco-ChrAcco03 7408742 7409543 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0537 27 178 Cytoplasmic Ribosomal Protein Gene Family AT4G36130 50.327 3.64e-43 144