Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0530 ATGGATCAAAATATATCATGGCTAATAGAGATTGCAATTGAGAAAGAAAAGTTTGGTCAAAAACACAAACGAAAAGAAACTGAGAAAGAGGAGAGAAGCGTACCACGAGTTACGGCAATGGAGCTTTCAATTTCAACTTGGAACCATGTCTCATCCGCACCCCTCAAATGCTTTCCTTCTATTTCTAACTTCACCATTCTCGCCGTTTCCTCCTCTCCTGTTCCTTCATCTGCCTCTTCTGCCTTCTCGCCGAGGAGATTTTCTGCGTTGGCCGTTCCAAAACGCTGTCGTTTCCGACGCGTTTCCGCCTCCGCTGCTTCCGGAGGTGACAATTCCCGACAGTCTGGTGAACTTTCGTCCCTCGCACCTGAAATTGTTGTTCTCAATGTTGAGGGTATGATGTGCGAGGGATGTGCAGATAGTGTGAAGAAACTTCTAGAGAGTCAGCCTCAGGTATCATCTGCTAGTGTAAATCTAACCGAAAAAATAGCAACAGTTTGGCCAGCACCTGAAGCAAAAACTGAATTAAATTGGCATAATAAATTCGGTGGTGGACTTGCTGCGCATTTAACTAACTGCGGCTTCAAGTCTAGCCTTCAAGGACATTGTATTCAGCCTTATCCACGTATCACTGGGCAAGATAGAATTCAAAAGGGCATTGTGTTTGTGAAAAATCTATTTAAATGGCAGGTCAGGAAGATAGCAACTGAAGAGTTATACCATAGGAGGCAAAGCAGGCGAGTCTTTGTTAGGCTTCTTGTGGCCGGGTATTTGATAAAGCCGTCTGTTAATATGAAGAAATTTGCTGGTGTTCAATATGAAATAAGCAATCCACCAAGATTATAA 846 0.4338 MDQNISWLIEIAIEKEKFGQKHKRKETEKEERSVPRVTAMELSISTWNHVSSAPLKCFPSISNFTILAVSSSPVPSSASSAFSPRRFSALAVPKRCRFRRVSASAASGGDNSRQSGELSSLAPEIVVLNVEGMMCEGCADSVKKLLESQPQVSSASVNLTEKIATVWPAPEAKTELNWHNKFGGGLAAHLTNCGFKSSLQGHCIQPYPRITGQDRIQKGIVFVKNLFKWQVRKIATEELYHRRQSRRVFVRLLVAGYLIKPSVNMKKFAGVQYEISNPPRL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0530 281 ProSitePatterns Heavy-metal-associated domain. 130 159 IPR017969 GO:0046872
Acco03g0530 281 ProSiteProfiles Heavy-metal-associated domain profile. 124 198 IPR006121 GO:0046872
Acco03g0530 281 CDD HMA 127 167 IPR006121 GO:0046872
Acco03g0530 281 Gene3D - 125 202 - -
Acco03g0530 281 FunFam Copper-transporting ATPase PAA1, chloroplastic 124 199 - -
Acco03g0530 281 SUPERFAMILY HMA, heavy metal-associated domain 125 171 IPR036163 GO:0046872
Acco03g0530 281 Pfam Heavy-metal-associated domain 127 176 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0530 Acco-ChrAcco03 7324752 7326945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0530 124 198 Primary Pumps ATPases AT4G33520 61.333 7.74e-27 103