Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0521 ATGGAGTTCATGGATCTTTCTCATAACCATTTGTCTGGTGTGGTTCCTAAGTCCTTAGAGGCATTACTCCATCTCAAATATATTAATCTTTCCTACAATTTATTGTATGGAGAAATTCCAAATGGTGGCCCTTTTCAAAATTTTACTGCTGAATCTTTTATGATGAATAAAGATCTTTGTGGGAAATCTCAACTACATGTCCAACCATGTAGGAAAGGAAACAAGGACAAATCAAAAAAAGTGATGCTGATTATAAAATTCTCATTGCCCATCACGGTTGTCATTTTGGTTGTTTTAGGCATTGTCTTTCTTAAGCATAGGAGAGATGATGATGATAATTCAACCAAAAGCAATTTAATCAATTTGGATACACTAACTAGGATATCCTATTATGAGCTTCTACGAGGAACAAATGGATTTGATGAGAGTAATCTTCTTGGCTCTGGAAGTTTTGGATCAGTATACAAAGCAGTTCTTCCAAATGAAGAGATAGTTGCTGTCAAAGTATTTAACTTATATGTGGAAGAAGCATTAAGAAGTTTTGATGTTGAATGTGCCACCATGTGCAATTTGCGCCATCGCAATCTCATTAAGATTATGAGTTGTTGCTCAAATGAACATTTCAAATCTCTAATAATGGAATTCATGGAAAATGGGAGTCTTGACAGATGGTTGTATTCTCATAACTATTATTTAGGTGTTTTGCAAAGGATGAACATAATGATTGATGTGGCAACAGCTTTGGAGTATCTTCATGATGGTTCTCCTATACCTGTTGTTCACTAATACGGATTGGAAGGAGTTGTTTCTGCCAAAGGAGATGTGTATAGTTATGGTATTTTGCTTATGGAAGTGTTTACGAGGAAGAAGCCCACAGATGAGATGTTTGTTCAAGGATTAAGTTTGAAAGATTGGGTGAGCAAATCCACTAAACTTTCAATCACCAATATTATAGATGCCAATATATTGCATAGAGAAAATCAAAATATTGATAATATATTACCTCAGATATCATCAGTTTTTGAGTTAGCATTAAATTGTTGCCTTGACTTGCCTAAGGCACGATATACTATGACTAATGTTGTGGTGTCATTGAAAAAAAATCAAGGCTTCACTTATTGA 1122 0.3449 MEFMDLSHNHLSGVVPKSLEALLHLKYINLSYNLLYGEIPNGGPFQNFTAESFMMNKDLCGKSQLHVQPCRKGNKDKSKKVMLIIKFSLPITVVILVVLGIVFLKHRRDDDDNSTKSNLINLDTLTRISYYELLRGTNGFDESNLLGSGSFGSVYKAVLPNEEIVAVKVFNLYVEEALRSFDVECATMCNLRHRNLIKIMSCCSNEHFKSLIMEFMENGSLDRWLYSHNYYLGVLQRMNIMIDVATALEYLHDGSPIPVVHXYGLEGVVSAKGDVYSYGILLMEVFTRKKPTDEMFVQGLSLKDWVSKSTKLSITNIIDANILHRENQNIDNILPQISSVFELALNCCLDLPKARYTMTNVVVSLKKNQGFTY 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0521 373 FunFam Serine-threonine protein kinase plant-type 120 215 - -
Acco03g0521 373 PANTHER OS04G0122200 PROTEIN 262 359 - -
Acco03g0521 373 SUPERFAMILY L domain-like 2 56 - -
Acco03g0521 373 ProSitePatterns Protein kinases ATP-binding region signature. 146 168 IPR017441 GO:0005524
Acco03g0521 373 Pfam Protein tyrosine and serine/threonine kinase 144 254 IPR001245 GO:0004672|GO:0006468
Acco03g0521 373 Gene3D Ribonuclease Inhibitor 1 79 IPR032675 -
Acco03g0521 373 ProSiteProfiles Protein kinase domain profile. 140 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0521 373 Gene3D Phosphorylase Kinase; domain 1 102 215 - -
Acco03g0521 373 SUPERFAMILY Protein kinase-like (PK-like) 115 365 IPR011009 -
Acco03g0521 373 Gene3D Transferase(Phosphotransferase) domain 1 216 262 - -
Acco03g0521 373 Gene3D Transferase(Phosphotransferase) domain 1 263 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0521 Acco-ChrAcco03 7145666 7147141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0521 4 365 Receptor kinase-like Gene Family AT3G47570 34.389 4.84e-67 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Acco03g0521 PK_Tyr_Ser-Thr 2e-20 CL0016