Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0516 ATGGAGTTTCCACTTTTTGCTCTTGAACATGGTCTCGTCGCTGTTCTTCTTGCTGCACAATTATTGAGCACACTTGTTGTGGCTCAAGATAGTCCTTTTGGTAACCCTGTGGAGAAAGATGCTCTTCATGGTCTCAAGGCCAATTTCAATGACTTTTTTCTGAATAGTAACTGGATTGGCTTCCCCTGCAATGAGGCTGAACAGTCAAGATGGTTCGGGATTCGGTGTAGTACCAGTGGTCGAGTCACAGGGATCATACTGGAAGGTATGGGGCTAACGGGAAAAATCGATGTCAACGCGTTCTTCAACCTTACAGAATTGTCTATTCTGAGCTTCAAGAATAATTCCATGAAGGGAAATTTGATGGATTTCTCCAACAATCATCAATTGAAGTACATTGATTTATCCAGCAATGAGTTCGATGGACCAATAACAAGATCCCTTCTGAATCTTAACCTCTTGGAAACGTTGTTACTGCAAGATAATAAGCTCATAGGTCCACTTCCAGAGTTCAGTCAACCAAGTTTGAAGATAATCAATGTGTCAGGCAATAATCTTCATGGCAAAGTCCGAATAACTCAAAACTTTCGATCAAGGGGGCCTAATTCATTTTCCGGCAATCCCAGATTATGTGGTCCTCTTTCTCTCAAATCCTACAGCTCTAGCTTGAAAGCTTCAGTTCCAACACCAGGAGGCTACTCAGAAAACGAGGAGGCTGAAAACCAGAATGGATCTTCAAATAAAAACAACACTTCCACTATCCTGATAATTTTCAACGTGTTTCTTCTGTTTGCAATAATCTTGCTAGCTTTTTTTTACTACAAGACATCTAAGAAGCTCAACAACATTATGAAGCAGCAGATTCCCATTAATAAGGATGTGGTGGAGAGTACTGTTGATAAGGTCGAAATGAGAGATCGTCACAGTTCGGTAGTTGTGGCAGTGGAAGAGAAGAAGGAGCTTATATTCTTTACAGATGAACCAAAGTTTCAAATGAATGAACTCTTAAAGGCTTCTGCAGAGGGACTGGGTCAGGGAATAATGGGAAACAGCTACAAGGCTATGCTGAATGGAGGAGCTTCCATTGTTGTAAAGAGGCTGAGGGACTTGAAGCCAATGACAAGAGAGGATTTTGCAAAGCAATTGCATGAAATTGCTGATCTGAAGCATCCAAATTTGTTGTCTCTGCTTGCTTATTACAGTTCCAGAGATGAGAGGTTGCTGCTCTACAGATATGCAGAGAAGGGGAATCTTTTCTTTAGGCTTCATGGAAACAGAAGTGGAAACCGGATTCCATTCACATGGAACTCAAGATTATCAGTGGCAAAAGGGGTAGCAAGAGGATTAACATACCTTCATCTCAATGCCAACCCCAACAACAGCACCACCATGGCTCCCCATGGAAACTTGAAGTCATCAAATGTCCTACTAGATGAAAACGACAAGGTCCTCGTCTCCGACTACCGACTTTCCCCACTCATAGCACAACCCAAAGCAGCTCAACGCATGGTCGTTTACAAATCACCCGAATACGGGCACACCAGGAAAGTATCAAAGCAATCTGATGTCTGGAGCTATGGAAGCCTTCTCATAGAACTTTTAACAGGCAGGTTATCTTCATGTTCAGCCCCACCTGGAGTTACCGGGTCGGATCTCTCGAACTGGGTCCACCGAGCAGTGAGGGAGGAATGGACGGCGGAGATATTCGATAAGGAAATTTCCGGTCAGAGAGGTGCCCTTCCCGGAATGCTAAGATTGCTTCAGATCGCCATGCGTTGCACCGACAGGTCCCCTGAGAATCGGCCAGATATGAGGGAGGTGGTGAGAGAAGTGGAGAAGATTGAGGTGGTTCCATGGATATCAGAAGATGAAGAAGCTTCTGGAGATCGATCTATAACAACAGATGATTCTCTATACTCAACCAGTACTACTGCCTCAGTTATTATTGGAGATGACCGGTAG 1962 0.4378 MEFPLFALEHGLVAVLLAAQLLSTLVVAQDSPFGNPVEKDALHGLKANFNDFFLNSNWIGFPCNEAEQSRWFGIRCSTSGRVTGIILEGMGLTGKIDVNAFFNLTELSILSFKNNSMKGNLMDFSNNHQLKYIDLSSNEFDGPITRSLLNLNLLETLLLQDNKLIGPLPEFSQPSLKIINVSGNNLHGKVRITQNFRSRGPNSFSGNPRLCGPLSLKSYSSSLKASVPTPGGYSENEEAENQNGSSNKNNTSTILIIFNVFLLFAIILLAFFYYKTSKKLNNIMKQQIPINKDVVESTVDKVEMRDRHSSVVVAVEEKKELIFFTDEPKFQMNELLKASAEGLGQGIMGNSYKAMLNGGASIVVKRLRDLKPMTREDFAKQLHEIADLKHPNLLSLLAYYSSRDERLLLYRYAEKGNLFFRLHGNRSGNRIPFTWNSRLSVAKGVARGLTYLHLNANPNNSTTMAPHGNLKSSNVLLDENDKVLVSDYRLSPLIAQPKAAQRMVVYKSPEYGHTRKVSKQSDVWSYGSLLIELLTGRLSSCSAPPGVTGSDLSNWVHRAVREEWTAEIFDKEISGQRGALPGMLRLLQIAMRCTDRSPENRPDMREVVREVEKIEVVPWISEDEEASGDRSITTDDSLYSTSTTASVIIGDDR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0516 653 SUPERFAMILY Protein kinase-like (PK-like) 342 618 IPR011009 -
Acco03g0516 653 Gene3D Transferase(Phosphotransferase) domain 1 414 628 - -
Acco03g0516 653 Pfam Protein tyrosine and serine/threonine kinase 341 610 IPR001245 GO:0004672|GO:0006468
Acco03g0516 653 ProSiteProfiles Protein kinase domain profile. 337 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0516 653 SMART serkin_6 337 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0516 653 Gene3D Ribonuclease Inhibitor 36 219 IPR032675 -
Acco03g0516 653 SUPERFAMILY L domain-like 65 464 - -
Acco03g0516 653 Gene3D Phosphorylase Kinase; domain 1 302 412 - -
Acco03g0516 653 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 615 IPR046959 -
Acco03g0516 653 MobiDBLite consensus disorder prediction 227 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0516 Acco-ChrAcco03 7021045 7023667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0516 71 637 Receptor kinase-like Gene Family AT5G58300 35.880 1.98e-96 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco03g0516 PK_Tyr_Ser-Thr 9.9e-28 CL0016