Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0506 ATGGAAGCTTTATCCTTAACATCATCCCTAATTGTTCCCTATAGGCCTTCCCATGGCCTAAACCAGAGGCTTCATGTTGCTGAGCACTTTTACAAGATCTTGTCTTTGAATCCGGAGAGTGCGACCAAAGATGAGATAAAGAAGGCTTATAGAATGATGGCACTTCAGTACCACCCGGACATGTGCCAAGATCCTTCGAGGAAGGAGAAGTGTACGAGGATGTTTGTGCAGCTCCATGCAGCTTACCAGACATTATCGGATCCAGTGCTTCGAGAAGAGTATGATTATGAACTCGGCTTAATCACAAGCAAGAGGAATAATAAGAGTGTTAATGGAGTTGGAGGTGAAAGATGGAGAAGAAGGTGGGAAGATCAATTGGTTAAGTTGAAGAGAAGGTCTAATACAAGAATGGCTCAAAAGGAAGGATCATCTTGGGGAAGTAGAATTAGGGCTCAAAACATGAAAAATCATAATTAA 477 0.4214 MEALSLTSSLIVPYRPSHGLNQRLHVAEHFYKILSLNPESATKDEIKKAYRMMALQYHPDMCQDPSRKEKCTRMFVQLHAAYQTLSDPVLREEYDYELGLITSKRNNKSVNGVGGERWRRRWEDQLVKLKRRSNTRMAQKEGSSWGSRIRAQNMKNHN 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0506 158 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 26 156 - -
Acco03g0506 158 MobiDBLite consensus disorder prediction 138 158 - -
Acco03g0506 158 SMART dnaj_3 28 90 IPR001623 -
Acco03g0506 158 PRINTS DnaJ domain signature 32 50 IPR001623 -
Acco03g0506 158 PRINTS DnaJ domain signature 50 65 IPR001623 -
Acco03g0506 158 PRINTS DnaJ domain signature 70 90 IPR001623 -
Acco03g0506 158 Gene3D DnaJ domain 20 114 IPR036869 -
Acco03g0506 158 Pfam DnaJ domain 30 95 IPR001623 -
Acco03g0506 158 CDD DnaJ 30 87 IPR001623 -
Acco03g0506 158 ProSitePatterns Nt-dnaJ domain signature. 75 94 IPR018253 -
Acco03g0506 158 ProSiteProfiles dnaJ domain profile. 29 98 IPR001623 -
Acco03g0506 158 MobiDBLite consensus disorder prediction 134 158 - -
Acco03g0506 158 SUPERFAMILY Chaperone J-domain 27 98 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0506 Acco-ChrAcco03 6781451 6782006 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0506 31 95 C2H2 Transcription Factor Family AT1G74250 40.299 3.76e-07 47.0