Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0505 ATGGAAGCTTTATCCTTAACATCATCCCTAATTTTTCCCTATAGGCCTTCCCATGGCCTTAACCAGAGGCTTCATGTTGCTCAACGTGTTTCTTGCAGAGCGAGAAAGCCAGTTGTTGAGGTTGAAGAGACAACTTCTAAAGACTTCTACAAGATGTTGTCTTTGAATCCGGAGAGTGCGACCAAAGATGAGATAAAGAAGGCTTATAGAATGATGGCACTTCAGTACCACCCGGACATGTGCCAAGATCCTTCGAGGAAGGAGAAGTGTATGAGGATGTTTGTGCAGCTCCATGCAGCTTACCAGACATTATCGGATCCAGTGCTTCGGCAAGAGTATGATTATGAACTCGGCTTGATCACAAGCAAGAGGAATAATAAGAGTGTCAATGGAGTTGGAGGTGAAAGATGGAGAAGAAGGTGGGAAGATCAATTGGTTGAGTTGAAGAGAAGGTCTAATACAAGAATGGCTAGGAAGGATCATCTTGGGGGAGTAGAATTAGGGCTCAAAACATGA 516 0.4399 MEALSLTSSLIFPYRPSHGLNQRLHVAQRVSCRARKPVVEVEETTSKDFYKMLSLNPESATKDEIKKAYRMMALQYHPDMCQDPSRKEKCMRMFVQLHAAYQTLSDPVLRQEYDYELGLITSKRNNKSVNGVGGERWRRRWEDQLVELKRRSNTRMARKDHLGGVELGLKT 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0505 171 PRINTS DnaJ domain signature 51 69 IPR001623 -
Acco03g0505 171 PRINTS DnaJ domain signature 89 109 IPR001623 -
Acco03g0505 171 PRINTS DnaJ domain signature 69 84 IPR001623 -
Acco03g0505 171 SMART dnaj_3 47 109 IPR001623 -
Acco03g0505 171 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 20 159 - -
Acco03g0505 171 CDD DnaJ 48 106 IPR001623 -
Acco03g0505 171 Pfam DnaJ domain 48 114 IPR001623 -
Acco03g0505 171 Gene3D DnaJ domain 36 133 IPR036869 -
Acco03g0505 171 ProSiteProfiles dnaJ domain profile. 48 117 IPR001623 -
Acco03g0505 171 ProSitePatterns Nt-dnaJ domain signature. 94 113 IPR018253 -
Acco03g0505 171 SUPERFAMILY Chaperone J-domain 44 117 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0505 Acco-ChrAcco03 6749198 6749713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0505 50 114 C2H2 Transcription Factor Family AT1G74250 38.806 3.59e-06 44.3