Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g0499 ATGGGAAATATGAAGGGAGTGATTTCGTCTTTGATAGCTTCGTTTTCTTTTTTGGCGATTTTAATGCTTGATTTGGTGCTAAAGATTTCTGGTAATGCAGAAGGTGATGCCCTGAATGCATTGAGGACCAGTATGGCCGATCCTAACAGTGTTCTTCAAAGTTGGGATCCTACCCTTGTAAATCCCTGCACTTGGTTTCATGTTACATGCAACACTGACAATAGTGTGACCCGTGTTGATCTTGGAAATGCAAACCTTTCGGGTCAACTGGTTCCACAGCTTGGTCAGCTCTCAAATTTACAATACTTGGAACTTTATAGTAATAATATAAGTGGAAAAATCCCGGATGAGCTGGGGAACTTGACCAACTTGGTGAGCTTGGATCTTTATTTGAACAAATTAAGTGGTCCCATACCAGACACTTTGAGCAAGCTTCAGAGATTACGGTTCCTGCGTCTCAATAACAACAGCTTGTCGGGAAGTATTCCTGTCTCTTTGACTAATGTTGCTTCACTGCAAGTCCTTGATCTTTCAACCAACCAGTTAAAAGGAGATATACCAGTTAACGGTTCATTTTCATTGTTTACCCCCATCAGTTTTAATAATAATCCTGGATTGAGACAACCAAAGGTCACTCCAAATCCTCCATCTTCTCCAACACCGCTGGCAAATTCAGGTAACAGTGATACTGCGGCTATTGCTGGTGGAGTTGCTGCAGGTGCTGCTTTGTTGTTTGCAGCCCCTGCAATTGCTCTTGCATATTGGCGAAGAAGGAAACCACAGGAATATTTCTTTGATGTTCCTGCTGAGGAGGATCCTGAAGTTCACCTTGGTCAGCTTAAACGATTTTCGTTGCGTGAGCTGCAAGTTGCAACAGATAACTTCAGTAACAAAAACATTCTAGGTAGAGGTGGTTTTGGGAAGGTTTATAAAGGACGCTTGGCTGATGGTTCTCTAGTAGCAGTGAAAAGATTGAAAGAAGAACGCACCCAAGGTGGGGAGCTGCAATTTCAAACAGAAGTGGAAATGATTAGTTTGGCTGTGCATCGAAATTTGCTCCGGCTGCGTGGTTTCTGCATGACACCAACAGAAAGGTTGCTTGTGTATCCATACATGGTTAATGGAAGTGTAGCATCATGTTTAAGAGAGCGTCCAGAATCACAACAACCACTTGACTGGAAAATACGGAAGCGTATTGCATTGGGAGCTGCTAGGGGACTTGCTTATCTGCATGATCACTGTGACCCGAAGATCATTCATCGTGATGTAAAGGCAGCAAATATATTGTTGGATGAGGAATTTGAAGCAGTTGTGGGGGACTTTGGGCTTGCAAAACTCATGGATTACAAAGATACTCATGTTACTACTGCTGTTCGTGGTACAATTGGGCATATAGCTCCAGAGTACCTCTCTACTGGAAAGTCTTCTGAGAAGACTGATGTTTTTGGATATGGTGTTATGCTTCTTGAACTAATAACTGGACAGAGAGCTTTTGATCTTGCACGGCTTGCCAACGATGATGATGTCATGTTGCTTGATTGGGTGAAAGGACTTTTGAAAGACAAGAAATTGGAAATTCTGGTAGATGCTGATTTACAAGGGAATTATATTGAAGAGGAGGTTGAGCAACTAATCCAGGTGGCATTACTATGCACACAAGGCACTCCTTTGGAAAGACCCAGAATGTCAGAGGTGGTCCGAATGCTCGAAGGCGACGGTCTGGCGGAGAAGTGGGAGCAATGGCAGAAAGACGAGATGTTCCGGCAAGACTTCCAGTACGTTCACCACCCAAATGCTAATTGGATAGTGGACTCAACCTCACACATCCCTCCAGATGAGCTATCGGGTCCCAGATGA 1857 0.4362 MGNMKGVISSLIASFSFLAILMLDLVLKISGNAEGDALNALRTSMADPNSVLQSWDPTLVNPCTWFHVTCNTDNSVTRVDLGNANLSGQLVPQLGQLSNLQYLELYSNNISGKIPDELGNLTNLVSLDLYLNKLSGPIPDTLSKLQRLRFLRLNNNSLSGSIPVSLTNVASLQVLDLSTNQLKGDIPVNGSFSLFTPISFNNNPGLRQPKVTPNPPSSPTPLANSGNSDTAAIAGGVAAGAALLFAAPAIALAYWRRRKPQEYFFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTQGGELQFQTEVEMISLAVHRNLLRLRGFCMTPTERLLVYPYMVNGSVASCLRERPESQQPLDWKIRKRIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKKLEILVDADLQGNYIEEEVEQLIQVALLCTQGTPLERPRMSEVVRMLEGDGLAEKWEQWQKDEMFRQDFQYVHHPNANWIVDSTSHIPPDELSGPR 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g0499 618 SMART serkin_6 295 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0499 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Acco03g0499 618 MobiDBLite consensus disorder prediction 204 227 - -
Acco03g0499 618 Gene3D Transferase(Phosphotransferase) domain 1 372 589 - -
Acco03g0499 618 FunFam Somatic embryogenesis receptor kinase 1 264 371 - -
Acco03g0499 618 Gene3D Ribonuclease Inhibitor 30 215 IPR032675 -
Acco03g0499 618 FunFam Somatic embryogenesis receptor kinase 1 30 217 - -
Acco03g0499 618 ProSiteProfiles Protein kinase domain profile. 295 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0499 618 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 13 580 - -
Acco03g0499 618 Pfam Protein kinase domain 296 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g0499 618 FunFam Somatic embryogenesis receptor-like kinase 1 372 589 - -
Acco03g0499 618 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Acco03g0499 618 Gene3D Phosphorylase Kinase; domain 1 264 371 - -
Acco03g0499 618 SUPERFAMILY Protein kinase-like (PK-like) 274 570 IPR011009 -
Acco03g0499 618 SUPERFAMILY L domain-like 34 198 - -
Acco03g0499 618 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g0499 Acco-ChrAcco03 6667593 6674282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g0499 11 618 Receptor kinase-like Gene Family AT4G33430 77.356 0.0 972
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Acco03g0499 Pkinase 1.2e-44 CL0016